Gene
| Gene Model ID | pfu_aug1.0_1541.1_00756 |
|---|---|
| Locus | scaffold1541.1 : 12176 ... 46722 : + |
| To GenomeBrowser | scaffold1541.1:12176..46722 |
| Genes list of scaffold | scaffold1541.1 |
| Synonym | pfu_aug2.0_754.1_14524 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1541.1_00756.t1 | 3 | 1 | Myosin_head | 26 | 109 | 0.0 | 537.3 | 2.4e-29 | 2.0e-26 | 92.2 |
| pfu_aug1.0_1541.1_00756.t1 | 3 | 2 | Myosin_head | 109 | 364 | 0.0 | 537.3 | 0.0 | 0.0 | 328.3 |
| pfu_aug1.0_1541.1_00756.t1 | 3 | 3 | Myosin_head | 362 | 476 | 0.0 | 537.3 | 3.09967e-42 | 2.6e-39 | 134.8 |
| pfu_aug1.0_1541.1_00756.t1 | 3 | 1 | Myosin_tail_1 | 520 | 678 | 0.0 | 1147.1 | 5.3e-08 | 4.3e-05 | 21.4 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 1 | Reo_sigmaC | 526 | 630 | 1.6e-08 | 34.1 | 0.00019 | 0.16 | 11.1 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 2 | Reo_sigmaC | 624 | 717 | 1.6e-08 | 34.1 | 0.0025 | 2.0 | 7.4 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 3 | Reo_sigmaC | 668 | 796 | 1.6e-08 | 34.1 | 0.003 | 2.5 | 7.2 |
| pfu_aug1.0_1541.1_00756.t1 | 3 | 2 | Myosin_tail_1 | 678 | 721 | 0.0 | 1147.1 | 3.3e-08 | 2.7e-05 | 22.1 |
| pfu_aug1.0_1541.1_00756.t1 | 3 | 3 | Myosin_tail_1 | 745 | 1560 | 0.0 | 1147.1 | 0.0 | 0.0 | 1116.6 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 4 | Reo_sigmaC | 755 | 872 | 1.6e-08 | 34.1 | 0.17 | 140.0 | 1.4 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 5 | Reo_sigmaC | 821 | 910 | 1.6e-08 | 34.1 | 0.012 | 9.8 | 5.2 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 6 | Reo_sigmaC | 914 | 992 | 1.6e-08 | 34.1 | 0.0014 | 1.2 | 8.2 |
| pfu_aug1.0_1541.1_00756.t1 | 5 | 1 | Tropomyosin | 941 | 1060 | 9.9e-06 | 24.8 | 0.0012 | 1.0 | 8.3 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 7 | Reo_sigmaC | 1047 | 1168 | 1.6e-08 | 34.1 | 1.3e-05 | 0.011 | 14.9 |
| pfu_aug1.0_1541.1_00756.t1 | 5 | 2 | Tropomyosin | 1055 | 1274 | 9.9e-06 | 24.8 | 0.00098 | 0.8 | 8.7 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 8 | Reo_sigmaC | 1172 | 1239 | 1.6e-08 | 34.1 | 0.079 | 65.0 | 2.5 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 9 | Reo_sigmaC | 1245 | 1323 | 1.6e-08 | 34.1 | 0.0078 | 6.4 | 5.8 |
| pfu_aug1.0_1541.1_00756.t1 | 5 | 3 | Tropomyosin | 1264 | 1415 | 9.9e-06 | 24.8 | 1.2e-08 | 9.9e-06 | 24.8 |
| pfu_aug1.0_1541.1_00756.t1 | 10 | 10 | Reo_sigmaC | 1344 | 1459 | 1.6e-08 | 34.1 | 9.4e-06 | 0.0078 | 15.4 |
| pfu_aug1.0_1541.1_00756.t1 | 5 | 4 | Tropomyosin | 1420 | 1477 | 9.9e-06 | 24.8 | 0.00059 | 0.48 | 9.4 |
| pfu_aug1.0_1541.1_00756.t1 | 5 | 5 | Tropomyosin | 1495 | 1557 | 9.9e-06 | 24.8 | 0.0021 | 1.7 | 7.6 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 2 |
| maleGonad | 1 |
| mantle | 2 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1541.1_00756.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1541.1_00756.t1 atgcaggcctggtccatgctgcaaattcgtctgttctgctatggatttcgaaaatgtataacatttgtaccacttgatcg agaaaatcagtctatgttgatcacaggtgaaagtggagcaggaaaaaccgagagtacaaagaaagtgatacaatatttcg ctcaagtggcggctaacatttatagggaagatcagaaggctaaaaagaccatcgacacaccctatattggctcgctagaa gaccagattattcaggccaatcctgttttggaagcatacggtaatgccaagacaactcgtaataacaactcttcgagatt cggtaacttggaggaccaaatcattcaggccaacccggtcctggaagcctttggtaacgccaagacaatcaggaacaata actcttcacgtttcgggaaatttatcaggatccatttcggtcctaccggaaagattgctggggcagacattgaaacttac ttgctggagaaatctcgggttactttccaacaacctgcggagagagactatcatatcttttatcagttgttgagcaatgc cttcccagagagaaacgagaagttgttggtacagccggaccctggacttttttctttcatcaaccaaggcgccctgacgg tggataccattgatgacgtggaggagatgaagattacagatgaagcctttgatattttgggattcactcaagaagagaag cactccatgtaccgctgtactaccgccattatgcacatgggagagatgagattcaaacagcgaccacgagaagaacaggc cgaagccgacggcactgctgaggcggagaaggtcgccttcttgcttggtatcaatgctggtgatctgctcaagtgtctat tgaagccaaagattaaagtgggaaatgagattgtcacccagggaagaaacaaagatcaggttgtatattccgttggtgcc ctagcgaagtccttgtatgacaggatgtttaagtggttggtgatgcgtgtcaacaagacactggacaccaaggccaagag gaactacttcattggtgtcctggatattgctgggttcgagatttttgcagaatctttgaacaagcttatgaaaaatctat acagcactcatccccactttgtccgctgtattattccgaacgagttcaaacagccaggtgttatcgatgcccacctcgtg ttgaatcagcttcagtgtaatggcgtacttgaaggaatccgtatttgtcgtaaggggttccccagcagagtcatctattc tgaattcaaacagagatactccatcttggcccccaatgccatccctcaaggcttcgctgacggtaaaatcgtcaccgaga aaattttgctggcccttcagttggacccagctgagtatcgcctcggtaataccaaggtgtttttcaaggctggcgtcctc ggtatgctggaagagatgcgtgatgagcgcctcggtaagatcatcacgatgttccaggcctacatccgaggatatctcat gaggaagagttacaagaaactacaggatcagagcaanaaccagaaggttgacttggagggacaactgaaggagatggagg aacgtctacttgacgaggaagacgccgctgctgagctggagcagatcaagaagaagattgagaacgaaaatgatgaactc aagaaggacattgaagacctagaaaactctctggctaaggcagaacaagagaagtcgactcgtgacaatcagatcaaaac cctgcaagatgagatggcccaacaagacgatatgatagccaaactgaacaaggagaagaagagcatggatgagacacaaa agaaaacaatggctgctttacaggcggaggaggacaaggtcaaccatcttaataagctgaaacagaaactagaacagact ctggatgaccttgaagataatttggagcgagaaaagaagattcgtggtgatgttgaaaaggcgaagaggaaactagagca ggatttgaaagctacacaaggtgaagttgaggacttggagcgtatcaaacgtgacttggaagaacatcttaaaaagaaag ataatgagattgccaatctgaattcccgactagaggatgagcagagcctggtagctcagctacaaagaaaaatcaaggag ctcttgattaacatggagattggactttactgtttgacatcggagaaatctaattgtactcggaatccattcacaaaggc caggatagaggaactagaagaggagctggaagctgagagagcggctagatcaaaggttgagaaacagcgagcagaccttt cacgtgagctcgaggaccttagtgaacgcctggaggaggccggaggagctacatcagcccagatcgagctgaacaagaag agagaacaagaactcctgaagttacgtcgtgaccttgaggagcagaccctacaacatgaagcccaagtatcagcgctacg taagaaacaacaagatgctgctaatgaaatggctgaccagatcgatcagctccagaaaatcaaatctagagttgaaaagg agaagggtcagataaagagtgaacttgatgacgtacaagctcaggttcaacatgtcaacaaaagcaaggctcaagtcgac aaggtcaccaagcagctcgagggtcaattatcagatgccaacgctaagatcgaggagcagaatcgtgtcatagcagacct gacaaaccaaagaacaaggttccagtccgaggctaacgatctcgccgctcaacttgaagatgctgagtcacgtgccagtc agctagcgcgggaaaaacaagcacttcaacaacaactagaggaggctagaaacaatcttgaggaggagacacgagctcgt cagaagatgcaggctgatgtacgtaaccttcaggctgaccttgacagtgtaagagaacagctggaggaggaacaggagtc caaggctgacgtccttagacaactgtccaaggccaacaacgaggtccagatgtggagggccaaattcgaaggagaaggaa ctgcccgtgccgaggaactcgaggaagctaagcgcaagctcattgcaaaacttcaagaggccgagcaaaatgctgaaacc gccgaggcgaaggttgcagggttagagaaagccaaggctcgtctacagggtgagatggaagacttgatgatcgatgtaga gagagctaacgccaatgccaactctctggagaagaaacaacgtgcttttgataagacaattgctgaatggcaggccaagg tcaatgaccttcaagctgagctagagaatgctcagaaagaggcacgtggttactctgctgaactgttcagagtgaaagct cagtacgaggaatcccaagacagtatcgagtctctaagaagggagaacaagaacttagccgatgaaattcatgagcttac ggatcagttatcagagggcggccgtaacgtacatgaagttgagaaagccaaacgtcgtcttgaaatggagaaggaagaac tacaagccgctctggaggaggcggaagctgcccttgaacaggaagaagctaaagtaatgcgcgcgcagctggaaatctcc acagttcgccaggagattgacagacgtttacacgagaaggaagaggaattcgacaatactcgtcgtaatcatcagcgtgc gatggactctatgcaggccagtttggaggccgaagccaagggtaaagccgaagctatgagaattaagaagaaactagaac aggacatcaacgagttagagattgccttagatgccgccaatcgtggtaaagccgatctggaaaagaatgtcaaaaagtat caacaacagattagagaaatgcaaacccaaatcgaggaggaacaacgtctacgggacgaagcacgcgagtcttactccat gacggagcgtcgcgttgtcatgttgtctggtgaggtagaggagctcagagcagccttggaacaggccgagagggctcgca agggagctgaaaacgagcttatggaagctaatgaacgtgttaatgaactgtctgcccaagtatcatccatacaaggtcaa aagaggaagtgtgaacaagacattcaggccatgcagagtgatcttgatgagatgaacaatgaactgaaatcagccgacga tcgggccaaaaaagccgtggccgacgcagctcgattggccgacgagctccgggccgagcaggagcatagtcagcaaatcg agaagttccggaagggattggaatctcaggtcaaagagctccaagtccgactggacgaagcagaggcacaggctctgaaa ggcggaaagaagaccattgctaaactggaacaaagagtgcgcgaactggagagtgaactggatagtgaacaacgaaggca tgctgaaactcaaaagaacatgcgtaaggctgatcgtcgtctgaaggaactggcattcgcttctgacgaggaacgtaaga accaggagcggctccaagagatcattgacaaactacaagccaagatcaaaacttacaaacgtcaagtggaggaagctgag gaaattgccgccattaatctagctaagtaccgtaaggtacagcacgagcttgaggacgccgaggaacgagccgactccgc tgagggatcactgtcaaaattgcgggccaagaaccgcagctccgtgtccatgtcacgtgttagtgctagcccaatggaga gtttatcccccggtatagtaggccgtgggggtagcgttagccgtcctgatagggcgggaaggaaaatgagcaaactgctc aaacttcttagctgttttctccgtacgaagattgtaatggggaaaattccattccttccccactccccagtagtacgatg caagtccaaatcttctgtcgccgtcctccgggtatcgcgcatcttcagtttatcgccgctctgtgacgccgtccagttat cgccgttctgtaccaccatccagtga |
|
Protein
| Protein ID | pfu_aug1.0_1541.1_00756.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1541.1_00756.t1 MQAWSMLQIRLFCYGFRKCITFVPLDRENQSMLITGESGAGKTESTKKVIQYFAQVAANIYREDQKAKKTIDTPYIGSLE DQIIQANPVLEAYGNAKTTRNNNSSRFGNLEDQIIQANPVLEAFGNAKTIRNNNSSRFGKFIRIHFGPTGKIAGADIETY LLEKSRVTFQQPAERDYHIFYQLLSNAFPERNEKLLVQPDPGLFSFINQGALTVDTIDDVEEMKITDEAFDILGFTQEEK HSMYRCTTAIMHMGEMRFKQRPREEQAEADGTAEAEKVAFLLGINAGDLLKCLLKPKIKVGNEIVTQGRNKDQVVYSVGA LAKSLYDRMFKWLVMRVNKTLDTKAKRNYFIGVLDIAGFEIFAESLNKLMKNLYSTHPHFVRCIIPNEFKQPGVIDAHLV LNQLQCNGVLEGIRICRKGFPSRVIYSEFKQRYSILAPNAIPQGFADGKIVTEKILLALQLDPAEYRLGNTKVFFKAGVL GMLEEMRDERLGKIITMFQAYIRGYLMRKSYKKLQDQSXNQKVDLEGQLKEMEERLLDEEDAAAELEQIKKKIENENDEL KKDIEDLENSLAKAEQEKSTRDNQIKTLQDEMAQQDDMIAKLNKEKKSMDETQKKTMAALQAEEDKVNHLNKLKQKLEQT LDDLEDNLEREKKIRGDVEKAKRKLEQDLKATQGEVEDLERIKRDLEEHLKKKDNEIANLNSRLEDEQSLVAQLQRKIKE LLINMEIGLYCLTSEKSNCTRNPFTKARIEELEEELEAERAARSKVEKQRADLSRELEDLSERLEEAGGATSAQIELNKK REQELLKLRRDLEEQTLQHEAQVSALRKKQQDAANEMADQIDQLQKIKSRVEKEKGQIKSELDDVQAQVQHVNKSKAQVD KVTKQLEGQLSDANAKIEEQNRVIADLTNQRTRFQSEANDLAAQLEDAESRASQLAREKQALQQQLEEARNNLEEETRAR QKMQADVRNLQADLDSVREQLEEEQESKADVLRQLSKANNEVQMWRAKFEGEGTARAEELEEAKRKLIAKLQEAEQNAET AEAKVAGLEKAKARLQGEMEDLMIDVERANANANSLEKKQRAFDKTIAEWQAKVNDLQAELENAQKEARGYSAELFRVKA QYEESQDSIESLRRENKNLADEIHELTDQLSEGGRNVHEVEKAKRRLEMEKEELQAALEEAEAALEQEEAKVMRAQLEIS TVRQEIDRRLHEKEEEFDNTRRNHQRAMDSMQASLEAEAKGKAEAMRIKKKLEQDINELEIALDAANRGKADLEKNVKKY QQQIREMQTQIEEEQRLRDEARESYSMTERRVVMLSGEVEELRAALEQAERARKGAENELMEANERVNELSAQVSSIQGQ KRKCEQDIQAMQSDLDEMNNELKSADDRAKKAVADAARLADELRAEQEHSQQIEKFRKGLESQVKELQVRLDEAEAQALK GGKKTIAKLEQRVRELESELDSEQRRHAETQKNMRKADRRLKELAFASDEERKNQERLQEIIDKLQAKIKTYKRQVEEAE EIAAINLAKYRKVQHELEDAEERADSAEGSLSKLRAKNRSSVSMSRVSASPMESLSPGIVGRGGSVSRPDRAGRKMSKLL KLLSCFLRTKIVMGKIPFLPHSPVVRCKSKSSVAVLRVSRIFSLSPLCDAVQLSPFCTTIQ |
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