Gene
| Gene Model ID | pfu_aug1.0_15425.1_10815 |
|---|---|
| Locus | scaffold15425.1 : 1 ... 9944 : + |
| To GenomeBrowser | scaffold15425.1:1..9944 |
| Genes list of scaffold | scaffold15425.1 |
| Synonym | pfu_aug2.0_3790.1_02493 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15425.1_10815.t1 | 1 | 1 | F-box | 61 | 103 | 1.7e-07 | 30.7 | 8.6e-11 | 3.2e-07 | 29.8 |
| pfu_aug1.0_15425.1_10815.t1 | 1 | 1 | F-box-like | 63 | 101 | 1.6e-08 | 34.0 | 1.0e-11 | 3.7e-08 | 32.9 |
| pfu_aug1.0_15425.1_10815.t1 | 5 | 1 | WD40 | 144 | 174 | 2.5e-39 | 131.7 | 7.6e-12 | 2.8e-08 | 33.3 |
| pfu_aug1.0_15425.1_10815.t1 | 3 | 1 | Nup160 | 157 | 184 | 2.6e-09 | 35.7 | 2.0e-05 | 0.073 | 11.1 |
| pfu_aug1.0_15425.1_10815.t1 | 5 | 2 | WD40 | 178 | 215 | 2.5e-39 | 131.7 | 3.4e-13 | 1.3e-09 | 37.5 |
| pfu_aug1.0_15425.1_10815.t1 | 3 | 2 | Nup160 | 198 | 228 | 2.6e-09 | 35.7 | 0.00041 | 1.5 | 6.8 |
| pfu_aug1.0_15425.1_10815.t1 | 5 | 3 | WD40 | 219 | 255 | 2.5e-39 | 131.7 | 2.6e-09 | 9.7e-06 | 25.2 |
| pfu_aug1.0_15425.1_10815.t1 | 3 | 3 | Nup160 | 236 | 328 | 2.6e-09 | 35.7 | 9.1e-07 | 0.0034 | 15.5 |
| pfu_aug1.0_15425.1_10815.t1 | 5 | 4 | WD40 | 262 | 297 | 2.5e-39 | 131.7 | 1.5e-12 | 5.7e-09 | 35.5 |
| pfu_aug1.0_15425.1_10815.t1 | 5 | 5 | WD40 | 312 | 326 | 2.5e-39 | 131.7 | 0.49 | 1800.0 | -1.0 |
Transcript
| Transcript ID | pfu_aug1.0_15425.1_10815.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15425.1_10815.t1 gtttgttgacatgccgatgaggagacatatacaggacgagagcaatcctaaaagtttattgggatcagtgacaaatctgg atgacttcaaacaacaaacacaaaaaatacctaacaaagtcgtgtcgtttaatatacttcctgataagaaaaatatcaag gttcgacagcaccgagattttcttgccctcttaccagaaaacgtcgccttgaagattctaggctacctaactccgaaaga aatactcacatgtagtcgggtgagtaagacttggttcaaactggccaataacaatgacgtgtggatgaatgaatgtaagg aaatagacatcaaggttcctatcccatcaaaccctaactggaaacacgtctacagggataacttgtacttgaaaatcaac tgggaaaatggcgactgtcgaatgttggatctacggggacacactgaccaagtggaagagattatattcaacaataagta ccttgccagtggaagtcaagacaaaacaatcaaaatctgggaccttcgtaatgggaagttactccagaccctcgtgggtc ataaaaagggggtgtggtgcctcaacttttatacaaaaagtctcattgtcagcggatctcacgatggaaccataaaggta tggaatatgaagatgggactgtgtttacggaccattataggtcacgacggtcctgtatgggcaatggtccgccacgaaaa cacgctggtcagcacgtcacaggataaaatggctaagatatgggatatttcacgttgtatccacctacacaccttggcag gtcacggggctgctgtgttcgccgtagatatgagtgagaatggttcactggttataacaggatcagctgataagactgtt agaatttggagcacagagacagggaagcagttacagagaatctgggcgagtcagacaacttcaatcatggcggtcagcta tagtcaaggttatatagcttacagttatggagaaacgatatgtctgtacaataccaacccaaaagccaagaaaagactag tcagaacttacgaagagcactcgaaaaggtag |
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Protein
| Protein ID | pfu_aug1.0_15425.1_10815.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15425.1_10815.t1 FVDMPMRRHIQDESNPKSLLGSVTNLDDFKQQTQKIPNKVVSFNILPDKKNIKVRQHRDFLALLPENVALKILGYLTPKE ILTCSRVSKTWFKLANNNDVWMNECKEIDIKVPIPSNPNWKHVYRDNLYLKINWENGDCRMLDLRGHTDQVEEIIFNNKY LASGSQDKTIKIWDLRNGKLLQTLVGHKKGVWCLNFYTKSLIVSGSHDGTIKVWNMKMGLCLRTIIGHDGPVWAMVRHEN TLVSTSQDKMAKIWDISRCIHLHTLAGHGAAVFAVDMSENGSLVITGSADKTVRIWSTETGKQLQRIWASQTTSIMAVSY SQGYIAYSYGETICLYNTNPKAKKRLVRTYEEHSKR |
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