Gene
| Gene Model ID | pfu_aug1.0_15434.1_32549 |
|---|---|
| Locus | scaffold15434.1 : 35536 ... 58304 : + |
| To GenomeBrowser | scaffold15434.1:35536..58304 |
| Genes list of scaffold | scaffold15434.1 |
| Synonym | pfu_aug2.0_9.1_29958 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15434.1_32549.t1 | 2 | 1 | TNF | 124 | 197 | 1.0e-07 | 31.5 | 5.9e-06 | 0.044 | 13.3 |
| pfu_aug1.0_15434.1_32549.t1 | 2 | 2 | TNF | 293 | 337 | 1.0e-07 | 31.5 | 8.5e-07 | 0.0063 | 16.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15434.1_32549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15434.1_32549.t1 atgaatccaccagaactcgtacagaaaagtttactggaagacaggatatttcgttatcgtcggtcatacagacaggacag gtcaaagaggaaaagaaataaaaagcaccaaaaagtcgttcatatagaaggctcagggggtgaatcatacccagcgtatc caaagggtaacttcaaaattacatcatgtgatctacaaaggagctcaaagtcattcatcaacaaccagaaacacgtttat gttgctgtaggttgtatgtccttacctcttcattatattgtacagaaaatctctgcggcttattttgagggcagcagtcg aaaagaaagggttcgatgaacggacccttctgtaggctatgaaaccgttaagactgattcatcaggaagaactatcgtat tgatgagaactttcataactcaggatgaaaggggcagacgcgatggaatgtttagtccacacgactctatcaaccaattt ggggtatttaaattacactgtgatgatactgtaattgtccggcaggatacccccgcggggaacaatccccctgatttcat ttttgacgatgaacaatccttctttggaattatggataaatctaggagaaaacggcatcgtcgtggacaaagaagtcttc gaactcgtgtttcaaacttggagagacagattgagaatcttaaaggtgccatcctgaaacaagtagtgcaccttagagga tctagggaagtcaacagtcaagcgacaaggaatcctgtttatggtgttggctacgagaccgttaagactgattcatcagg aataactattgtattgatgagaactttcattactcaggatgaaaggggcagactcgatggaatgtatagaccacatggtt ctataaaccaatttggagtgttcaaattacactgtggcgacactatcgtcatacgacaggatacccccgttgaaaacaat cccccggatatcgtttttgacgaagaacagtccttttttggaatagtacagatcaatccaacaaatggtgcactagacgg aaattacgactgcaatgcaccctga |
|
Protein
| Protein ID | pfu_aug1.0_15434.1_32549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15434.1_32549.t1 MNPPELVQKSLLEDRIFRYRRSYRQDRSKRKRNKKHQKVVHIEGSGGESYPAYPKGNFKITSCDLQRSSKSFINNQKHVY VAVGCMSLPLHYIVQKISAAYFEGSSRKERVRXTDPSVGYETVKTDSSGRTIVLMRTFITQDERGRRDGMFSPHDSINQF GVFKLHCDDTVIVRQDTPAGNNPPDFIFDDEQSFFGIMDKSRRKRHRRGQRSLRTRVSNLERQIENLKGAILKQVVHLRG SREVNSQATRNPVYGVGYETVKTDSSGITIVLMRTFITQDERGRLDGMYRPHGSINQFGVFKLHCGDTIVIRQDTPVENN PPDIVFDEEQSFFGIVQINPTNGALDGNYDCNAP |
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