Gene
| Gene Model ID | pfu_aug1.0_1544.1_37049 |
|---|---|
| Locus | scaffold1544.1 : 56562 ... 66315 : - |
| To GenomeBrowser | scaffold1544.1:56562..66315 |
| Genes list of scaffold | scaffold1544.1 |
| Synonym | pfu_aug2.0_2988.1_29002 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1544.1_37049.t1 | 3 | 1 | Sushi | 23 | 55 | 1.2e-13 | 51.1 | 1.5e-07 | 0.0023 | 18.2 |
| pfu_aug1.0_1544.1_37049.t1 | 3 | 2 | Sushi | 68 | 103 | 1.2e-13 | 51.1 | 5.9e-07 | 0.0088 | 16.3 |
| pfu_aug1.0_1544.1_37049.t1 | 3 | 3 | Sushi | 111 | 161 | 1.2e-13 | 51.1 | 4.3e-09 | 6.4e-05 | 23.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1544.1_37049.t1 | gi|345308296|ref|XP_003428681.1| | 5.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_1544.1_37049.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1544.1_37049.t1 aatgtagtgctccacagtttgtgaatgtgatggaatctgccggtatggattttgttgggggtttgagatcattgacgtgt gattacggatacgagctaatttatggagtgacgtcactaatcatgacgtgtaaatctaatggagaatggaatggcacagc aaactgctcagtcgaaacgcctagtaatgggatcatatttcccggagaaaacatcgtcggatccacacgtaacgttcaat gtaatattggatatctcaatgtaggtgctcctcctacaattgaatgctttaacaacagaacatggaccaactggactggc tcttgtaaggcatgtgatgacccttacaccattccatatgctgttatcagtgacgtcaacgtaacagtaggaagtaatag gacgtatgcctgtaacatcggttttgaagacaacggggaatcccccttaattacatgcaatgaatctgctatgtggacca cgactgagttttcttgtagagttgttggtacgtga |
|
Protein
| Protein ID | pfu_aug1.0_1544.1_37049.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1544.1_37049.t1 CSAPQFVNVMESAGMDFVGGLRSLTCDYGYELIYGVTSLIMTCKSNGEWNGTANCSVETPSNGIIFPGENIVGSTRNVQC NIGYLNVGAPPTIECFNNRTWTNWTGSCKACDDPYTIPYAVISDVNVTVGSNRTYACNIGFEDNGESPLITCNESAMWTT TEFSCRVVGT |
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