Gene
Gene Model ID | pfu_aug1.0_15448.1_18223 |
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Locus | scaffold15448.1 : 14019 ... 21232 : - |
To GenomeBrowser | scaffold15448.1:14019..21232 |
Genes list of scaffold | scaffold15448.1 |
Synonym | pfu_aug2.0_392.1_07448 |
Manual annotation
Study field | Environmental Response |
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Gene name | D(2) dopamine receptor A |
Description | Similar (35%) to EGI66123.1| D(2) dopamine receptor A [Acromyrmex echinatior |
mRNA evidence |
Study field | Reproduction |
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Gene name | Pifuc-5-HT2-like |
Description | Most reliable BLASTP hit to NCBI Accession AAC16969, serotonin receptor 5-HT2 (Lymnaea stagnalis) at 1e-51. Although this sequence shows best hit to D(2)dopamine receptor A of Acromyrmex echinator (EGI66123.1),the annotation for the sequence seems tentative. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_15448.1_18223.t1 | 1 | 1 | 7tm_1 | 1 | 358 | 0.0 | 175.8 | 0.0 | 0.0 | 175.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_15448.1_18223.t1 | gi|3150433|gb|AAC16969.1| | serotonin receptor 5-HT2 [Lymnaea stagnalis] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_15448.1_18223.t1 |
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Definition | - |
>pfu_aug1.0_15448.1_18223.t1 gtcgatggctatttggatcaatagtgtgtaacatgtatgtgacggcagacgtgtttatgtgtacatcctctatcctacac ttgtgtaccatatccctggagcggtacatggccataagagcaccattaagtaccaggaacaaatcccgtacagtcgtcat actgaaagtaatacttgtatgggtgaccgccatggccatctctagtccaattactatccttgggatgatagatgataaaa atatcatagctcagggacagtgcattattaataatgactatttcaagctatatggatctctctgtgcattcttcattcct cttttcgtcatgattttctcctatagtttaacactgtttattctgattcgccgatctaagaaatgccattcaaggaaaaa agaatctgggcagcctcagataaggcgctctcttagcagaaagacaggtctaaagaaggtaacacgggtccatttccacg ctaaaagaccgaacaaatatccagccgaaacgcctaatgaagtttacaccgccatgatccccagaaaatctcgtttaaag ccccaggtgactagcctgtccgagggcgacctaagcagttcacccccagttattccacgtggtaaagtgtataatttcaa taacagattatcttcacccaatgattgttatcgagaaataaagcgcgaaaccacacgttttcagggtgataatgaccaga cattaaccggaagcagaagtttaccgaaacaaaatggcgtgtccgtgtcacatgaccaggcgcacagtcacttgagcgga ttagtacgtaagcaccaacttgtcataaaagcagctaatatcttactgatgagaaaaacgtcgccggtgtcgcccaaaaa ggatgacgtcactactgaacaaaaagcttctaaagttataggaattgtattcatgatttttgtcgtctgttgggcgccat ttttcataatgaatgtgataccgggcatgtgcaagcagtgttacctcaatccaactcttatgacagcttttgtgtggtta ggatatgtatctagcactctaaatccaattatatataccatgtttaacaaaacattcaaaattacgatgaaaaaattgat aatgtgccagtatgacaaactacaacggcacagaccagtgaaaagtaactggctaatgtcaaacgatgggggcgggtcta tatataacaaatcatccagcaataacagtctgggaccagatattgcatgttag |
Protein
Protein ID | pfu_aug1.0_15448.1_18223.t1 |
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Definition | - |
>pfu_aug1.0_15448.1_18223.t1 RWLFGSIVCNMYVTADVFMCTSSILHLCTISLERYMAIRAPLSTRNKSRTVVILKVILVWVTAMAISSPITILGMIDDKN IIAQGQCIINNDYFKLYGSLCAFFIPLFVMIFSYSLTLFILIRRSKKCHSRKKESGQPQIRRSLSRKTGLKKVTRVHFHA KRPNKYPAETPNEVYTAMIPRKSRLKPQVTSLSEGDLSSSPPVIPRGKVYNFNNRLSSPNDCYREIKRETTRFQGDNDQT LTGSRSLPKQNGVSVSHDQAHSHLSGLVRKHQLVIKAANILLMRKTSPVSPKKDDVTTEQKASKVIGIVFMIFVVCWAPF FIMNVIPGMCKQCYLNPTLMTAFVWLGYVSSTLNPIIYTMFNKTFKITMKKLIMCQYDKLQRHRPVKSNWLMSNDGGGSI YNKSSSNNSLGPDIAC |