Gene
| Gene Model ID | pfu_aug1.0_15448.1_18223 |
|---|---|
| Locus | scaffold15448.1 : 14019 ... 21232 : - |
| To GenomeBrowser | scaffold15448.1:14019..21232 |
| Genes list of scaffold | scaffold15448.1 |
| Synonym | pfu_aug2.0_392.1_07448 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | D(2) dopamine receptor A |
| Description | Similar (35%) to EGI66123.1| D(2) dopamine receptor A [Acromyrmex echinatior |
| mRNA evidence |
| Study field | Reproduction |
|---|---|
| Gene name | Pifuc-5-HT2-like |
| Description | Most reliable BLASTP hit to NCBI Accession AAC16969, serotonin receptor 5-HT2 (Lymnaea stagnalis) at 1e-51. Although this sequence shows best hit to D(2)dopamine receptor A of Acromyrmex echinator (EGI66123.1),the annotation for the sequence seems tentative. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15448.1_18223.t1 | 1 | 1 | 7tm_1 | 1 | 358 | 0.0 | 175.8 | 0.0 | 0.0 | 175.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15448.1_18223.t1 | gi|3150433|gb|AAC16969.1| | serotonin receptor 5-HT2 [Lymnaea stagnalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_15448.1_18223.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15448.1_18223.t1 gtcgatggctatttggatcaatagtgtgtaacatgtatgtgacggcagacgtgtttatgtgtacatcctctatcctacac ttgtgtaccatatccctggagcggtacatggccataagagcaccattaagtaccaggaacaaatcccgtacagtcgtcat actgaaagtaatacttgtatgggtgaccgccatggccatctctagtccaattactatccttgggatgatagatgataaaa atatcatagctcagggacagtgcattattaataatgactatttcaagctatatggatctctctgtgcattcttcattcct cttttcgtcatgattttctcctatagtttaacactgtttattctgattcgccgatctaagaaatgccattcaaggaaaaa agaatctgggcagcctcagataaggcgctctcttagcagaaagacaggtctaaagaaggtaacacgggtccatttccacg ctaaaagaccgaacaaatatccagccgaaacgcctaatgaagtttacaccgccatgatccccagaaaatctcgtttaaag ccccaggtgactagcctgtccgagggcgacctaagcagttcacccccagttattccacgtggtaaagtgtataatttcaa taacagattatcttcacccaatgattgttatcgagaaataaagcgcgaaaccacacgttttcagggtgataatgaccaga cattaaccggaagcagaagtttaccgaaacaaaatggcgtgtccgtgtcacatgaccaggcgcacagtcacttgagcgga ttagtacgtaagcaccaacttgtcataaaagcagctaatatcttactgatgagaaaaacgtcgccggtgtcgcccaaaaa ggatgacgtcactactgaacaaaaagcttctaaagttataggaattgtattcatgatttttgtcgtctgttgggcgccat ttttcataatgaatgtgataccgggcatgtgcaagcagtgttacctcaatccaactcttatgacagcttttgtgtggtta ggatatgtatctagcactctaaatccaattatatataccatgtttaacaaaacattcaaaattacgatgaaaaaattgat aatgtgccagtatgacaaactacaacggcacagaccagtgaaaagtaactggctaatgtcaaacgatgggggcgggtcta tatataacaaatcatccagcaataacagtctgggaccagatattgcatgttag |
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Protein
| Protein ID | pfu_aug1.0_15448.1_18223.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15448.1_18223.t1 RWLFGSIVCNMYVTADVFMCTSSILHLCTISLERYMAIRAPLSTRNKSRTVVILKVILVWVTAMAISSPITILGMIDDKN IIAQGQCIINNDYFKLYGSLCAFFIPLFVMIFSYSLTLFILIRRSKKCHSRKKESGQPQIRRSLSRKTGLKKVTRVHFHA KRPNKYPAETPNEVYTAMIPRKSRLKPQVTSLSEGDLSSSPPVIPRGKVYNFNNRLSSPNDCYREIKRETTRFQGDNDQT LTGSRSLPKQNGVSVSHDQAHSHLSGLVRKHQLVIKAANILLMRKTSPVSPKKDDVTTEQKASKVIGIVFMIFVVCWAPF FIMNVIPGMCKQCYLNPTLMTAFVWLGYVSSTLNPIIYTMFNKTFKITMKKLIMCQYDKLQRHRPVKSNWLMSNDGGGSI YNKSSSNNSLGPDIAC |
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