Gene
| Gene Model ID | pfu_aug1.0_15460.1_03614 |
|---|---|
| Locus | scaffold15460.1 : 9506 ... 15563 : + |
| To GenomeBrowser | scaffold15460.1:9506..15563 |
| Genes list of scaffold | scaffold15460.1 |
| Synonym | pfu_aug2.0_670.1_01024 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15460.1_03614.t1 | 2 | 1 | DUF2352 | 111 | 224 | 1.2e-36 | 126.1 | 0.0022 | 16.0 | 3.4 |
| pfu_aug1.0_15460.1_03614.t1 | 2 | 2 | DUF2352 | 258 | 555 | 1.2e-36 | 126.1 | 1.5e-39 | 1.1e-35 | 122.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15460.1_03614.t1 | gi|291222347|ref|XP_002731179.1| | 2.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_15460.1_03614.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15460.1_03614.t1 atgtctaaacaattccaaaggattatcaactctattgttgataacaaaagtactgttgatacaattcaaattgcttcaca atctgtaataattcgaaaaataaatgatcacgaaaatactccacttagatttgttaaggaggtaacaagtttgaggtccc caacgttggttgtgtacagaaatgatcatgatttcgatgatgacgtattcgatggaaatctctcaaaaagttccatttct gaatctgtatctgaaatctcagtttcgcgcagaaaagccccaaagagctcttttggaaattcaaataatagctcaagaat ggaaggaactaaagtgaatggaagtgacgttaaagatagtctcggaagcccaggttatgatggctcacctctcaaactac agctcattgcagacttgtcatcttcttcaatttctgcatttactgaggaaaatcaggatgcacggccagtggcaagggtc agcaggtatgggataaagtgtaacattgctaaaacacttgtcgcatggatgaacaacatcaatttacaattagaacacca actgcctcagcttgtgatattttgtaatgggaatgacattgcaaatactgctgttctgatggttgagagtacaatggggt acattaaagggacaaaagtaaccatgaggggacaaatattggaacaggatttgcagaatgaatttaaggagttgaatctc aaatatgcaacacagagcaagtgcatttattggcttgagactggtgaggttgactggctggtaaaggacactgattaccc cgcaaaagagcgagtcaaagagctcgtcaaacgtcttaaacttggagatgcagatctaaatgctacagttaataaagata tgaatgacaatgccaccaacggtcaagaagaaatcatgaactgcttggaaatgaattttgaccaggagaggaaggattat gactttactgatcacctgtggtccattctttgtcaatgcgtttcctatcaagattgtgtggaagccttggagtatgtgtt tgatgtattaaggaatggagatctgaatccattagtacaccgttacaatactaccacaatggctgagatggtgagagaat catactgtggtaaactacgggtgccaaacctggctgggctctaccccatacagctactagcagaaatgggcgcagagaaa ttacgtcaagattacgtgtacatgctgctgtcaaaggacctggtcacgttgggccaactccaatctctcattgatacaaa aggcactctgaagaagaagtacagttgtttagaacgtctgcatgcagtggcagaaatgattatcatgctgaacctgtacc ttcagattccctatgctaagctaagttcctgtgctaaggacatgttacagcattatgagcagaaccagttaaatcctaaa catgtttttacatttacaatgccagctaatctactcaagggagagctggagttgaagccttgtcattgggaaatggaagc gactagaagattaccaaacatcgtagcatcaaccaagtatatactgaggacatcacaaccattcccccacgttgaggcaa ggcctgtaggcagccagaatggacacatcacatcagagggttcagaatcagacatagcagcggaaaattactactacttc atcaaaaaggaagaaagccttaactacatgaagtaa |
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Protein
| Protein ID | pfu_aug1.0_15460.1_03614.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15460.1_03614.t1 MSKQFQRIINSIVDNKSTVDTIQIASQSVIIRKINDHENTPLRFVKEVTSLRSPTLVVYRNDHDFDDDVFDGNLSKSSIS ESVSEISVSRRKAPKSSFGNSNNSSRMEGTKVNGSDVKDSLGSPGYDGSPLKLQLIADLSSSSISAFTEENQDARPVARV SRYGIKCNIAKTLVAWMNNINLQLEHQLPQLVIFCNGNDIANTAVLMVESTMGYIKGTKVTMRGQILEQDLQNEFKELNL KYATQSKCIYWLETGEVDWLVKDTDYPAKERVKELVKRLKLGDADLNATVNKDMNDNATNGQEEIMNCLEMNFDQERKDY DFTDHLWSILCQCVSYQDCVEALEYVFDVLRNGDLNPLVHRYNTTTMAEMVRESYCGKLRVPNLAGLYPIQLLAEMGAEK LRQDYVYMLLSKDLVTLGQLQSLIDTKGTLKKKYSCLERLHAVAEMIIMLNLYLQIPYAKLSSCAKDMLQHYEQNQLNPK HVFTFTMPANLLKGELELKPCHWEMEATRRLPNIVASTKYILRTSQPFPHVEARPVGSQNGHITSEGSESDIAAENYYYF IKKEESLNYMK |
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