Gene
| Gene Model ID | pfu_aug1.0_15470.1_39700 |
|---|---|
| Locus | scaffold15470.1 : 1 ... 3005 : - |
| To GenomeBrowser | scaffold15470.1:1..3005 |
| Genes list of scaffold | scaffold15470.1 |
| Synonym | pfu_aug2.0_14.1_13372 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15470.1_39700.t1 | 1 | 1 | Metallophos | 10 | 246 | 1.7e-27 | 96.1 | 4.8e-31 | 2.4e-27 | 95.6 |
| pfu_aug1.0_15470.1_39700.t1 | 1 | 1 | Metallophos_2 | 10 | 270 | 3.7e-07 | 30.0 | 2.2e-10 | 1.1e-06 | 28.5 |
| pfu_aug1.0_15470.1_39700.t1 | 1 | 1 | Mre11_DNA_bind | 291 | 436 | 3.6e-39 | 134.3 | 1.19951e-42 | 6.1e-39 | 133.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15470.1_39700.t1 | gi|115911552|ref|XP_798167.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15470.1_39700.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15470.1_39700.t1 atgcctggttcagaaaatgacaacacacttaagattctggttgccactgacaaccatcttggatatggagaaaaggatca aatcaggggaaatgactccttggtgacttttgaagaaattctggagaatgcaaaaaagcatgaggttgatttcattttgt taggaggggatctattccatgagaataaacccccacgaaggattttacacggttgtatcgctttgttaagaacttactgt atgggagaaaagcctgtccagtttgaatatttaagtgaccaatcattagattttaagcactgtcagtttccaactctcaa ctatgaggatccaaatcttaacatttcaataccagtattttccatacatggtaaccatgacgatccaacaggtcaaggta acttgtgctcactggacttgttacatagtgccggattagtcaattattttggtaaaactacaaatttagagaaaattgaa atttcaccactactgcttcaaaaaggaagtacaaagttagcattgtatggaatgggatctataagagacgaaagacttca cagaatgtttgttcataaaaatgttacaatgcttcggccaagggaagaaaaagaggactggtttaatctatttgtgattc atcaaaacagatcaaagcattctgcaacgagccatataccggaacaattccttgatgacttcttagatttggtgatttgg ggacacgagcatgaatgtcgtatagaaccagagtggaacggtacccagaatttctatgtgtcacagccaggaagtagcgt agccacatctctttgtgaaggagaggctggtaagaaacatgttggtctcctgcagattcgtggcaaagacttcaaaatga caaaaatcccgcttaatacggtacgtcagttttacatggaggatgtcgtactgacagacacgtcgctggatcccactgac cataacatcgccaagcaggtggaggcgttctgtcttgagaaagtggaggccattctagagaaagcagctctggaacacac aggaaatcgtaaacagcctgataaacccctgatacgtttgaggatagattacagtggaggattcgaagccttcaatgcaa atagatttggacagaagtttgttgatagagttgccaatccaaaagacatgatatttttcactcgacggaaaattaccaaa gtaaaacctgaagaggagatggtacctgctgatacagatataagaatggtgaatctagatgcatcccgagtggaggacat ggtcagggatatcttctccaaatctgatgagtgcaaaagagctattgcaataccccctgagtcggcggcgtcagaactgg atgataag |
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Protein
| Protein ID | pfu_aug1.0_15470.1_39700.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15470.1_39700.t1 MPGSENDNTLKILVATDNHLGYGEKDQIRGNDSLVTFEEILENAKKHEVDFILLGGDLFHENKPPRRILHGCIALLRTYC MGEKPVQFEYLSDQSLDFKHCQFPTLNYEDPNLNISIPVFSIHGNHDDPTGQGNLCSLDLLHSAGLVNYFGKTTNLEKIE ISPLLLQKGSTKLALYGMGSIRDERLHRMFVHKNVTMLRPREEKEDWFNLFVIHQNRSKHSATSHIPEQFLDDFLDLVIW GHEHECRIEPEWNGTQNFYVSQPGSSVATSLCEGEAGKKHVGLLQIRGKDFKMTKIPLNTVRQFYMEDVVLTDTSLDPTD HNIAKQVEAFCLEKVEAILEKAALEHTGNRKQPDKPLIRLRIDYSGGFEAFNANRFGQKFVDRVANPKDMIFFTRRKITK VKPEEEMVPADTDIRMVNLDASRVEDMVRDIFSKSDECKRAIAIPPESAASELDDK |
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