Gene
| Gene Model ID | pfu_aug1.0_15470.1_39701 |
|---|---|
| Locus | scaffold15470.1 : 5346 ... 14989 : + |
| To GenomeBrowser | scaffold15470.1:5346..14989 |
| Genes list of scaffold | scaffold15470.1 |
| Synonym | pfu_aug2.0_14.1_13371 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15470.1_39701.t1 | 1 | 1 | DUF4586 | 1 | 57 | 9.4e-13 | 48.3 | 7.2e-17 | 1.1e-12 | 48.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15470.1_39701.t1 | gi|72090816|ref|XP_795744.1| | PREDICTED: UPF0602 protein C4orf47 homolog [Strongylocentrotus purpuratus] | 6.0e-17 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15470.1_39701.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15470.1_39701.t1 atgaaagctggtactttcgatccttatccctcccactctgcagatccttataaagtccgagttagtcgagccatcaacgt ggttaataagagcggtaaaatcttcatgccatcacaaggacccaaaaccacgcctactgtgtctattgttaaccaaaatg ttcagaaaacaatcaatatacagaactacaggtcagtgtcatctatcatatag |
|
Protein
| Protein ID | pfu_aug1.0_15470.1_39701.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15470.1_39701.t1 MKAGTFDPYPSHSADPYKVRVSRAINVVNKSGKIFMPSQGPKTTPTVSIVNQNVQKTINIQNYRSVSSII |
|