Gene
| Gene Model ID | pfu_aug1.0_15476.1_61500 |
|---|---|
| Locus | scaffold15476.1 : 8940 ... 21255 : - |
| To GenomeBrowser | scaffold15476.1:8940..21255 |
| Genes list of scaffold | scaffold15476.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15476.1_61500.t1 | 2 | 1 | Methyltransf_16 | 84 | 100 | 1.9e-09 | 37.1 | 0.64 | 1900.0 | -1.9 |
| pfu_aug1.0_15476.1_61500.t1 | 2 | 2 | Methyltransf_16 | 121 | 198 | 1.9e-09 | 37.1 | 1.9e-12 | 5.7e-09 | 35.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15476.1_61500.t1 | gi|260804677|ref|XP_002597214.1| | hypothetical protein BRAFLDRAFT_203344 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_15476.1_61500.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15476.1_61500.t1 atggagttctttcttgtcaaggcattacttggtggaaaatcttcagagacgtgtaagagccgtgtatcagtccgaagatt tagcagttttggactactccagacagaatatctcttcagcaacaataaggaagaaacatggcatcagtacacatgcgcag actttcctaacttcaaaatgaccataaagcatcttgcagggaaaataaatgccaattcattgaatggtttcaacaacact gggaatgtctgtgtgtggccatctgaggaggtcatggcgtattattgtataaaaaatctagatgaatttaggtattttat taacataaatatggatctgacagacattttgaatgataaaagcaatgctgaattactcagggaaactgaagtatcaagca gaatgttgagatggggagaagatgaactggacaaagatctcagaggtcactttgatataattatttgtgcagattgtctt ttctttgatgaaggaagagaggatttagtacaactggtctatgatctgctcaaacctaatggcaaatgctggatgtttgc gcctaagagaggggctacttttgatgaattcaaacaagttgcagaagaaaaattttacatcttagaggaggagagatttg aaaagaaagtctatgatcttcattgcaagttaaaggagagtggcacagatcaatatgatccaaacatccatttcccaatc catctgcagctaacaaagaaagacgtctcatag |
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Protein
| Protein ID | pfu_aug1.0_15476.1_61500.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15476.1_61500.t1 MEFFLVKALLGGKSSETCKSRVSVRRFSSFGLLQTEYLFSNNKEETWHQYTCADFPNFKMTIKHLAGKINANSLNGFNNT GNVCVWPSEEVMAYYCIKNLDEFRYFININMDLTDILNDKSNAELLRETEVSSRMLRWGEDELDKDLRGHFDIIICADCL FFDEGREDLVQLVYDLLKPNGKCWMFAPKRGATFDEFKQVAEEKFYILEEERFEKKVYDLHCKLKESGTDQYDPNIHFPI HLQLTKKDVS |
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