Gene
| Gene Model ID | pfu_aug1.0_1548.1_66021 |
|---|---|
| Locus | scaffold1548.1 : 15622 ... 25545 : - |
| To GenomeBrowser | scaffold1548.1:15622..25545 |
| Genes list of scaffold | scaffold1548.1 |
| Synonym | pfu_aug2.0_68.1_26796 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1548.1_66021.t1 | 2 | 1 | Tetraspannin | 37 | 192 | 8.7e-08 | 31.7 | 1.8e-11 | 8.7e-08 | 31.7 |
| pfu_aug1.0_1548.1_66021.t1 | 2 | 2 | Tetraspannin | 258 | 277 | 8.7e-08 | 31.7 | 0.043 | 210.0 | 1.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1548.1_66021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1548.1_66021.t1 atgcttattgaatcatcaaagatgcagcctgaagtttcaaacgtaccttcaacttggccctacgtgacaaagctagcaga gatcgaatctctgatgtcacaagaaatatacgacatctttctggtggctggttcatttggtgtcgtatcttcagtcattg cagttctttggattttatgtcagaaacttgtattactgaaaatatttgtatctgtatgtgctgttttcatcatcttggac atcactgcaattgccattcgacacaaattgttgacaaaagataaaactcagtttgattcaaatgaattgaaaaaagcatt ggtacaagatatctttgagaattttaaagatgatgttatcactggtaacgacaatcgatctgtggcatggaatgaattct tcatgaacatgagatgttgcggtataaacccagtatcagttgggtcgagaggggacttcgagcagagttactgggtaagg agcggggtggcgtcctcacagaaaatccccacctcctgctgtgttgacgtctccacagatagatatacagcccccactac atgtaaagataatgtcaatagaggaacatattactcagagggcatcgacggcgggtgcggctggccaacaggggatgctt actcctcccggacacctggtcccacctctagcttgctaggggtccgtcgatactcaatatggtgctctattggctgtctg agcaaattaacattagaataccctgtcagcctgacataccttgataatgctttaggatgcacagttgccatcttgattat acatattatgatgtgtgctatgtcggtttatttcatcttcaaaggaacagagaaatttagaaaatatagagcagataaga cggagaaagcaaatagtatcccagataacgtcgtgtgtggaagctaa |
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Protein
| Protein ID | pfu_aug1.0_1548.1_66021.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1548.1_66021.t1 MLIESSKMQPEVSNVPSTWPYVTKLAEIESLMSQEIYDIFLVAGSFGVVSSVIAVLWILCQKLVLLKIFVSVCAVFIILD ITAIAIRHKLLTKDKTQFDSNELKKALVQDIFENFKDDVITGNDNRSVAWNEFFMNMRCCGINPVSVGSRGDFEQSYWVR SGVASSQKIPTSCCVDVSTDRYTAPTTCKDNVNRGTYYSEGIDGGCGWPTGDAYSSRTPGPTSSLLGVRRYSIWCSIGCL SKLTLEYPVSLTYLDNALGCTVAILIIHIMMCAMSVYFIFKGTEKFRKYRADKTEKANSIPDNVVCGS |
|