Gene
| Gene Model ID | pfu_aug1.0_155.1_57998 |
|---|---|
| Locus | scaffold155.1 : 43515 ... 71005 : - |
| To GenomeBrowser | scaffold155.1:43515..71005 |
| Genes list of scaffold | scaffold155.1 |
| Synonym | pfu_aug2.0_623.1_11005 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_155.1_57998.t1 | 4 | 1 | BRCT | 54 | 127 | 2.0e-24 | 85.5 | 1.3e-16 | 6.6e-13 | 48.6 |
| pfu_aug1.0_155.1_57998.t1 | 2 | 1 | PTCB-BRCT | 59 | 122 | 2.8e-26 | 91.1 | 7.3e-22 | 3.6e-18 | 65.1 |
| pfu_aug1.0_155.1_57998.t1 | 4 | 2 | BRCT | 431 | 505 | 2.0e-24 | 85.5 | 4.5e-11 | 2.2e-07 | 30.9 |
| pfu_aug1.0_155.1_57998.t1 | 2 | 2 | PTCB-BRCT | 442 | 501 | 2.8e-26 | 91.1 | 7.2e-09 | 3.6e-05 | 23.5 |
| pfu_aug1.0_155.1_57998.t1 | 4 | 3 | BRCT | 654 | 680 | 2.0e-24 | 85.5 | 0.14 | 680.0 | 0.5 |
| pfu_aug1.0_155.1_57998.t1 | 4 | 4 | BRCT | 737 | 775 | 2.0e-24 | 85.5 | 0.27 | 1300.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_155.1_57998.t1 | gi|198414774|ref|XP_002127395.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_155.1_57998.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_155.1_57998.t1 atgtcaacgtccacatccctgcatgtcaacatccacatcccagtggcaggtgacctaggcaaacagatcatgttggctcc atgggtcaatgctgtacttgaagcctcaagagaaaaatatatacacggtacagatgacgtcttccaggagtacgtgtgtc ctgtgtttaaaagtttggtggtcaccgtgtctggcctggactcggaggaacgtaatattgtccgcaaaactgtagagagt aatggaggaaaatactcaggggagatgaaagtgaacgagtgtacgcatcttattataaacaaaccaaaaggaactaaata tagctttgctaagaagtggaagatccacattgtacgttcagattggctgtatgactctgtagaacgaggttattgtctgg acgagaggaaattctctgtagatggcgactctggaagcgatgataaatccagcgttaaaacttcaactccagaaaaagaa gatgctaatagaaaggatactaaaccgtcacagaacacagacgatgaattctctgacattatgagccagtatctactaca agctgatcaagggatggcaggatcaagggagactaccgtggttaaccagaatcctccaccagagggcagtcaagaccaag atgacgatctcacacaggatccaaacaaagatggtaaccatgacaacgaaatggacgttgaccctgctgacaataaccaa aatgtgtcggaaaatatgcatgtagaagagcaagaaagggacagaaaaagtgagcaaagtaatgaaaatgaggggtcaaa tgttcgtgataatgaggtcaaagttcagtcacctgaggtcaaagatcaatcacctatggaaagtgctgtgcaggaaaatg gatcaaggacaagccagaaggagaacattgggttcagggacacacctgtagctcagaaccaaagggtcaaggagttacaa gggagctctaagataacacccaagaattcacggacaaagaaagacgagcttgagacgccatctccaacccgcttcatgga tcttactagaccattcagaccaaaatttgatctcactgatttacaaaagtttcttgagactccagaacctgagaggaaaa aacgtgaagaggagagaaaaaacaaaaggtccagtctgtctttggaggaagtgtttgcattccatcttgacaaagctgtt aaatttacatctcaatacaagaaaaaatcagtagacatggagggcatggaggaggagggagaagtctttatacctgacca gatgaaggcaggtccactacaaggtgtcattatagcagtagccaagaagctgagttcagaacagagcgagttaaacaaca tcgtagacagtctgggtggggactatagatggcagtatgactcatcctgtactcactttatattccagggtagagctaat gacacaaccaaggagttccgagtggctcgagatcagaaaaagacaatcgtttctcctcactggctctatatgtgcaaaga acaaaatacccgagttgatgagtcgtcctttccacataattataaccccaacctaacgctgacgaaaaggttagaacagg aacgtttagcagatcgcttggcccgggctatgagccctacacaggacatgaacgtagatctgggagcggagttttctgat gtagaagaagatgaacaagccctggccaacatggaggacgctcagcaactgcaaggtgaggacaaaaaagaagagaccag agttcccacaccagaggcgccccctatcgctttccctgtaaacaaacagtctactcatgtagagcctcccaaacctattg tattggatgatgaggaaaatgtacaacaagaaaaccgtccaccacctgtgttcatgctctctggtctcagtcaagaggtc ttgactttgattgaaaacatacatacagtctcctcagctacaccggccagaaatgaaaagtttttatcgtgtgtagcagc ggggaagtgggttttacataagtcatactttgaggcctgtagacaagaaggtacctttgtacaggaggagttttatgaat ggggaggtgaaggtaccaaaggcctggtggacagaatgacaaccagtaaaaaactggccctggcagcccataactggagg gtcaaaatacaacaggactcccagagttcccccatgtctcgtggtgccttcagtgggtggactgtgttaatatgtactga tgcaaagaaagaagaaaattttagacgtcttttacaagcaggcggtgcaactgtcctcggtatcaaaccaccattctcag ggaatatatcagctagccactcctttgttgaccttaatagagcagctttatcattctatattataacattatactatatc attattgatacttcagaccaccattctcagggaatatatcagctagccacgcctttgttggcctaa |
|
Protein
| Protein ID | pfu_aug1.0_155.1_57998.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_155.1_57998.t1 MSTSTSLHVNIHIPVAGDLGKQIMLAPWVNAVLEASREKYIHGTDDVFQEYVCPVFKSLVVTVSGLDSEERNIVRKTVES NGGKYSGEMKVNECTHLIINKPKGTKYSFAKKWKIHIVRSDWLYDSVERGYCLDERKFSVDGDSGSDDKSSVKTSTPEKE DANRKDTKPSQNTDDEFSDIMSQYLLQADQGMAGSRETTVVNQNPPPEGSQDQDDDLTQDPNKDGNHDNEMDVDPADNNQ NVSENMHVEEQERDRKSEQSNENEGSNVRDNEVKVQSPEVKDQSPMESAVQENGSRTSQKENIGFRDTPVAQNQRVKELQ GSSKITPKNSRTKKDELETPSPTRFMDLTRPFRPKFDLTDLQKFLETPEPERKKREEERKNKRSSLSLEEVFAFHLDKAV KFTSQYKKKSVDMEGMEEEGEVFIPDQMKAGPLQGVIIAVAKKLSSEQSELNNIVDSLGGDYRWQYDSSCTHFIFQGRAN DTTKEFRVARDQKKTIVSPHWLYMCKEQNTRVDESSFPHNYNPNLTLTKRLEQERLADRLARAMSPTQDMNVDLGAEFSD VEEDEQALANMEDAQQLQGEDKKEETRVPTPEAPPIAFPVNKQSTHVEPPKPIVLDDEENVQQENRPPPVFMLSGLSQEV LTLIENIHTVSSATPARNEKFLSCVAAGKWVLHKSYFEACRQEGTFVQEEFYEWGGEGTKGLVDRMTTSKKLALAAHNWR VKIQQDSQSSPMSRGAFSGWTVLICTDAKKEENFRRLLQAGGATVLGIKPPFSGNISASHSFVDLNRAALSFYIITLYYI IIDTSDHHSQGIYQLATPLLA |
|