Gene
| Gene Model ID | pfu_aug1.0_1550.1_66026 |
|---|---|
| Locus | scaffold1550.1 : 58886 ... 76815 : - |
| To GenomeBrowser | scaffold1550.1:58886..76815 |
| Genes list of scaffold | scaffold1550.1 |
| Synonym | pfu_aug2.0_77.1_23377 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1550.1_66026.t1 | 5 | 1 | LRR_8 | 6 | 39 | 1.0e-23 | 82.8 | 1.3e-08 | 2.8e-05 | 23.7 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 1 | LRR_4 | 6 | 39 | 1.0e-16 | 60.1 | 9.3e-07 | 0.002 | 17.7 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 1 | LRR_1 | 6 | 24 | 3.3e-14 | 50.7 | 0.00038 | 0.8 | 9.9 |
| pfu_aug1.0_1550.1_66026.t1 | 7 | 1 | LRR_7 | 7 | 19 | 2.4e-07 | 29.8 | 0.0016 | 3.5 | 8.2 |
| pfu_aug1.0_1550.1_66026.t1 | 7 | 2 | LRR_7 | 28 | 41 | 2.4e-07 | 29.8 | 0.0083 | 18.0 | 6.1 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 2 | LRR_1 | 29 | 51 | 3.3e-14 | 50.7 | 0.00076 | 1.6 | 9.0 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 2 | LRR_4 | 41 | 84 | 1.0e-16 | 60.1 | 0.62 | 1300.0 | -0.9 |
| pfu_aug1.0_1550.1_66026.t1 | 5 | 2 | LRR_8 | 87 | 124 | 1.0e-23 | 82.8 | 0.0004 | 0.85 | 9.4 |
| pfu_aug1.0_1550.1_66026.t1 | 7 | 3 | LRR_7 | 87 | 102 | 2.4e-07 | 29.8 | 0.011 | 22.0 | 5.8 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 3 | LRR_4 | 88 | 125 | 1.0e-16 | 60.1 | 0.00043 | 0.91 | 9.2 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 3 | LRR_1 | 88 | 107 | 3.3e-14 | 50.7 | 0.0044 | 9.2 | 6.7 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 4 | LRR_1 | 114 | 125 | 3.3e-14 | 50.7 | 0.99 | 2100.0 | -0.5 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 4 | LRR_4 | 250 | 293 | 1.0e-16 | 60.1 | 4.5e-07 | 0.00094 | 18.7 |
| pfu_aug1.0_1550.1_66026.t1 | 5 | 3 | LRR_8 | 254 | 309 | 1.0e-23 | 82.8 | 1.2e-07 | 0.00026 | 20.7 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 5 | LRR_1 | 277 | 293 | 3.3e-14 | 50.7 | 0.00092 | 2.0 | 8.7 |
| pfu_aug1.0_1550.1_66026.t1 | 7 | 4 | LRR_7 | 277 | 290 | 2.4e-07 | 29.8 | 0.062 | 130.0 | 3.5 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 5 | LRR_4 | 301 | 341 | 1.0e-16 | 60.1 | 0.0021 | 4.5 | 7.0 |
| pfu_aug1.0_1550.1_66026.t1 | 5 | 4 | LRR_8 | 321 | 362 | 1.0e-23 | 82.8 | 3.5e-10 | 7.3e-07 | 28.8 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 6 | LRR_4 | 329 | 362 | 1.0e-16 | 60.1 | 7.2e-07 | 0.0015 | 18.0 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 6 | LRR_1 | 329 | 351 | 3.3e-14 | 50.7 | 0.002 | 4.2 | 7.7 |
| pfu_aug1.0_1550.1_66026.t1 | 7 | 5 | LRR_7 | 329 | 344 | 2.4e-07 | 29.8 | 0.29 | 620.0 | 1.4 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 7 | LRR_4 | 353 | 392 | 1.0e-16 | 60.1 | 6.0e-10 | 1.3e-06 | 27.9 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 7 | LRR_1 | 353 | 372 | 3.3e-14 | 50.7 | 0.014 | 29.0 | 5.2 |
| pfu_aug1.0_1550.1_66026.t1 | 7 | 6 | LRR_7 | 353 | 364 | 2.4e-07 | 29.8 | 0.24 | 510.0 | 1.7 |
| pfu_aug1.0_1550.1_66026.t1 | 5 | 5 | LRR_8 | 371 | 398 | 1.0e-23 | 82.8 | 1.3e-05 | 0.027 | 14.2 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 8 | LRR_4 | 376 | 416 | 1.0e-16 | 60.1 | 1.7e-06 | 0.0036 | 16.8 |
| pfu_aug1.0_1550.1_66026.t1 | 8 | 8 | LRR_1 | 377 | 393 | 3.3e-14 | 50.7 | 5.4e-06 | 0.012 | 15.5 |
| pfu_aug1.0_1550.1_66026.t1 | 7 | 7 | LRR_7 | 377 | 391 | 2.4e-07 | 29.8 | 0.0031 | 6.5 | 7.4 |
| pfu_aug1.0_1550.1_66026.t1 | 1 | 1 | TIR | 533 | 584 | 5.4e-09 | 35.6 | 7.4e-12 | 1.6e-08 | 34.1 |
Transcript
| Transcript ID | pfu_aug1.0_1550.1_66026.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1550.1_66026.t1 atgaatgtccatggcattcaggaattagacgtttcaaattgtcacctgacaaatatcttagaaggaactttttcatacat tacaaatcttacacatttggatatatcgtataacgaggaactatcattcaatatcctgagaaatatctctaaagatctta aaaatacgaaaattgaagttttaaagattaacaaaatacattgcactttcggagtcggaacacaaatatacgtgtctgat ttgaaggatctacagaactcatcgctcagagaactatacgcgaacagtaaccgtctagagacgatacaaagtggtgttct tatgtatctaccaaaaactctacagcatgcatcagtgtccgataataaactgacaatggggatgtacgcgctggaaacag ctaacttggtcaacctgaagacttatgatatgagtctccaattcaaatctcatgatcccagggatatattcagtaattgt aatgatacacgtaatggatatatcagaaatcgtagaccacatgaatcggaaggggaaataagtgtcaggaagaaattgtt gaatgacatgatatatcgttggaaagaggaccaggcttttgaagactatcagaacacgtccaatgataatcaacacaagt taatgtttccatttccctctccttttccagttcctcttccacagaggttagagatagcgtatttcaacacaagtacttta cattatccacttttaaagtatagaattggaaataataaaataaaggaaatatatgctcaagataatgtgttttacgacct acaaggtcccctagaaaatttggaggggcttgaaattctagacttgagcaataatttctgtactaacctttccacgttct tttttgactacttgactggcttgaagagtgttaaactaaatcataatatactcggctttagcttggcaaaggacgaaaaa ggagaaactttcaagaatttgctaaagttaaaacatttggagatcaaatataatcgaatacaagtacttccaaaaaagat tcttcgaagcttaatctcactggagacactgaatctggcggacaactggttgagaaagtttaaggtaaaccttaagcata taaagggattacgtcatatagacctatcaaataatcagatatcggagttgcctcccggggttatgagagagctagatgaa attgcgaaatccagtaatttaaccgtgaatctgacgggaaattccctactttgcaattgtgaaaacgagcatttcttacg ctggatagtaacttctacaatacaatttggcttccatgaaaacgatacttgccagacaagatttagtaaaactgggcgag ttcttatgtcacaaggtcatgaatttctgttggtgcttgaaaggaactgtaggtcctacactgctgtcattgtgttattt tcatgtgtgttcgttattctactcacagttatagtctgtggggtggtatacaggtatcgatggaagttgaggtatttgta ctacatgactaagggacggtacaaagggtattcttcacttaaaacgaaatccgaagagggggattatgaattcgatgcat tcatttcctacgcggacgaagatagacaatttgcacttcacgatatgatgaaaaatgtggaaagagagggaaatctaaag ctatgtttccataacagggactttatacccggatttgacatcgcagaaaacattaccaacgctataaataacaaccattt gaaccatccaacaacagactatacttgtatcttccgaaatggaagtaaccggatgtga |
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Protein
| Protein ID | pfu_aug1.0_1550.1_66026.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1550.1_66026.t1 MNVHGIQELDVSNCHLTNILEGTFSYITNLTHLDISYNEELSFNILRNISKDLKNTKIEVLKINKIHCTFGVGTQIYVSD LKDLQNSSLRELYANSNRLETIQSGVLMYLPKTLQHASVSDNKLTMGMYALETANLVNLKTYDMSLQFKSHDPRDIFSNC NDTRNGYIRNRRPHESEGEISVRKKLLNDMIYRWKEDQAFEDYQNTSNDNQHKLMFPFPSPFPVPLPQRLEIAYFNTSTL HYPLLKYRIGNNKIKEIYAQDNVFYDLQGPLENLEGLEILDLSNNFCTNLSTFFFDYLTGLKSVKLNHNILGFSLAKDEK GETFKNLLKLKHLEIKYNRIQVLPKKILRSLISLETLNLADNWLRKFKVNLKHIKGLRHIDLSNNQISELPPGVMRELDE IAKSSNLTVNLTGNSLLCNCENEHFLRWIVTSTIQFGFHENDTCQTRFSKTGRVLMSQGHEFLLVLERNCRSYTAVIVLF SCVFVILLTVIVCGVVYRYRWKLRYLYYMTKGRYKGYSSLKTKSEEGDYEFDAFISYADEDRQFALHDMMKNVEREGNLK LCFHNRDFIPGFDIAENITNAINNNHLNHPTTDYTCIFRNGSNRM |
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