Gene
| Gene Model ID | pfu_aug1.0_15505.1_03621 |
|---|---|
| Locus | scaffold15505.1 : 29626 ... 39957 : + |
| To GenomeBrowser | scaffold15505.1:29626..39957 |
| Genes list of scaffold | scaffold15505.1 |
| Synonym | pfu_aug2.0_3792.1_09227 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15505.1_03621.t1 | 1 | 1 | Zona_pellucida | 54 | 253 | 1.2e-11 | 44.6 | 1.1e-15 | 1.7e-11 | 44.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_15505.1_03621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15505.1_03621.t1 atggggaagttctgggtttttttttacgcctttcgattgcggtttttggaatctggtttccgctttcattcaaaatgtac caaaggaaaccagggaaaagttataatttcagtaaataaaaacataaacaacttagcatctgcccatatggtagtaactg gaaaacaaccatgtagtgtgtctgatctgacagcggaattccaactcaacgactgccctgtggatacagatatcaaagtg aaagtgacaatggacaataggactgatcatatagtgaccgacaaggacatcgctgcatacacactacgatgccactatga tactaaaatattctatgccatggtctcagttgctcatatatcaattatagatgctacaccaacgcaacctacagccagtg ttcataatgtgaaaatgtcaacaccaacgccacctacatttactatgacgttagataaaaccaaagttagtattggagaa acagttaagattacaatcaaaggtccagcaaatgaggtattttcaccagaagaatgcgtggctatgggcgggaaatacaa tcatactctatggagctcaaattgtgacgatgttgatacagaactattcgaaacgacagactggaacaatgaaaccagca cttctatcacgcacagtttctttgccttccgattcactgacagtaccgacattacactgatatgtaaacttaaagtatgc cctgttggtctggaaaaccagtgctctttgggttgtgtggccggtggaggtaatggagtaacccaggctaccggtaggag gcggcgctccatcacagaggaggacactgctgtggtgcaaaccagcttcacggtatcagattcagagtctgcattcacgg aatcttctgccgtcgacccatacctaaagaatggattgcgccaaagaacatttttcatcacattacaattgttacatcga tataacaaatactga |
|
Protein
| Protein ID | pfu_aug1.0_15505.1_03621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15505.1_03621.t1 MGKFWVFFYAFRLRFLESGFRFHSKCTKGNQGKVIISVNKNINNLASAHMVVTGKQPCSVSDLTAEFQLNDCPVDTDIKV KVTMDNRTDHIVTDKDIAAYTLRCHYDTKIFYAMVSVAHISIIDATPTQPTASVHNVKMSTPTPPTFTMTLDKTKVSIGE TVKITIKGPANEVFSPEECVAMGGKYNHTLWSSNCDDVDTELFETTDWNNETSTSITHSFFAFRFTDSTDITLICKLKVC PVGLENQCSLGCVAGGGNGVTQATGRRRRSITEEDTAVVQTSFTVSDSESAFTESSAVDPYLKNGLRQRTFFITLQLLHR YNKY |
|