Gene
| Gene Model ID | pfu_aug1.0_1555.1_58569 |
|---|---|
| Locus | scaffold1555.1 : 6431 ... 6995 : - |
| To GenomeBrowser | scaffold1555.1:6431..6995 |
| Genes list of scaffold | scaffold1555.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1555.1_58569.t1 | 2 | 1 | PHD | 58 | 67 | 5.7e-09 | 35.5 | 0.18 | 660.0 | 0.1 |
| pfu_aug1.0_1555.1_58569.t1 | 2 | 1 | PHD_2 | 64 | 68 | 2.0e-07 | 30.1 | 0.26 | 980.0 | -0.9 |
| pfu_aug1.0_1555.1_58569.t1 | 2 | 2 | PHD | 70 | 115 | 5.7e-09 | 35.5 | 2.3e-12 | 8.5e-09 | 34.9 |
| pfu_aug1.0_1555.1_58569.t1 | 2 | 2 | PHD_2 | 82 | 114 | 2.0e-07 | 30.1 | 5.4e-11 | 2.0e-07 | 30.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1555.1_58569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1555.1_58569.t1 atgttagatgatgatgagatagataatatagaaagtgaagagcaagaagaatgtgattcaagtgctaaaaatttattggc agatgtaaataacaatgctatggtacctagaagtaaaacagatcaacatactggaaacaaaaactctcgcagaaagataa aacttccgaagagacagaacgtctacccatgtggtaaatgtggacttgtatgcgcagagcaaccaaaaaattacaacgaa gaatcaattaactgtgatagctgcaaagtatggtatcactttgtatgcgttggtttaaaagaggttgatcagggtagcga gtggatgtgcgactcttgtaaatcagaggactaa |
|
Protein
| Protein ID | pfu_aug1.0_1555.1_58569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1555.1_58569.t1 MLDDDEIDNIESEEQEECDSSAKNLLADVNNNAMVPRSKTDQHTGNKNSRRKIKLPKRQNVYPCGKCGLVCAEQPKNYNE ESINCDSCKVWYHFVCVGLKEVDQGSEWMCDSCKSED |
|