Gene
| Gene Model ID | pfu_aug1.0_1555.1_58570 |
|---|---|
| Locus | scaffold1555.1 : 9176 ... 27624 : + |
| To GenomeBrowser | scaffold1555.1:9176..27624 |
| Genes list of scaffold | scaffold1555.1 |
| Synonym | pfu_aug2.0_9495.1_19686 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1555.1_58570.t1 | 1 | 1 | Ras | 7 | 145 | 1.1e-32 | 112.6 | 7.0e-36 | 2.1e-32 | 111.7 |
| pfu_aug1.0_1555.1_58570.t1 | 2 | 1 | Miro | 8 | 115 | 5.7e-14 | 52.6 | 6.6e-16 | 2.0e-12 | 47.6 |
| pfu_aug1.0_1555.1_58570.t1 | 1 | 1 | Arf | 9 | 124 | 5.4e-11 | 42.0 | 2.9e-14 | 8.6e-11 | 41.3 |
| pfu_aug1.0_1555.1_58570.t1 | 1 | 1 | GTP_EFTU | 28 | 117 | 7.7e-06 | 25.4 | 3.8e-09 | 1.1e-05 | 24.9 |
| pfu_aug1.0_1555.1_58570.t1 | 2 | 2 | Miro | 249 | 304 | 5.7e-14 | 52.6 | 0.065 | 190.0 | 2.5 |
| pfu_aug1.0_1555.1_58570.t1 | 1 | 1 | Peptidase_M8 | 282 | 371 | 3.6e-19 | 68.5 | 1.6e-22 | 4.7e-19 | 68.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1555.1_58570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1555.1_58570.t1 atgataaaatgctgccatgagagctgtatcatcaaaagatattgtgagaaaagatttgttcacaagtaccttacaacgat aggtattgactatggagttaccagagtatcaataaaggatcgtgatgtgaaggtgaatatctttgatatggctggacatc caatattttatgaggtacgcaatgagttttacaaggacacacagggtgctatcttggtgtacgatgttgcagatcgtcag agttttgaagccctcgatgcctggatgacggagatgcagaatgagattggcaatcagtcagaaatggacaatgttgttgt gtgtgtttgtgcaaataagtgtgacaagaagcgtactgtggatgaagcagaggggagagtttgggccgatgcacgaggat ttcactattttgaaacttctgcccagacaggaaaataccatcacaaacagaaagtacaaacacatggtagaatcaagagg aggaggaggaggtcagtgagtggtgaggtgtttaagccattgaggattcacacacattatatgaaagatctggaggctga actgtttgatagagacattctgtttctgactgaggcattagtaaatgttacaaagaaactgagcaacattctctcagtat cacctgttgagggtccattgctcttggatagaaaaaggggatgtcacaagaagtggggaaagggtgaaaatgctggcaga tgttctcagataaaaaggtattatacaggagaaatctgtgcagatgaactgaggattccagatgcccatctagatggttt atccatatggaacaaaacaggatctgaacctgtgaaaaaaatccattccccaggaccagggctgaatgatacagatttta ttttatatgtacaggcactcagtacaagatcatgtcagacttacaagggaagaaatgttctagcgtatgctgtatactgt caccagaataaagatggccgccccctgtcaggttacgtcaatgtttgcccacgacaactccaggcacacctctacagtaa agaacatatccaaatgattcttatgcacgaggtgatccatgctgttggtttttcatcaaggcttttcccccaattcttga attgtaaaggaangcatgggagattgtga |
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Protein
| Protein ID | pfu_aug1.0_1555.1_58570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1555.1_58570.t1 MIKCCHESCIIKRYCEKRFVHKYLTTIGIDYGVTRVSIKDRDVKVNIFDMAGHPIFYEVRNEFYKDTQGAILVYDVADRQ SFEALDAWMTEMQNEIGNQSEMDNVVVCVCANKCDKKRTVDEAEGRVWADARGFHYFETSAQTGKYHHKQKVQTHGRIKR RRRRSVSGEVFKPLRIHTHYMKDLEAELFDRDILFLTEALVNVTKKLSNILSVSPVEGPLLLDRKRGCHKKWGKGENAGR CSQIKRYYTGEICADELRIPDAHLDGLSIWNKTGSEPVKKIHSPGPGLNDTDFILYVQALSTRSCQTYKGRNVLAYAVYC HQNKDGRPLSGYVNVCPRQLQAHLYSKEHIQMILMHEVIHAVGFSSRLFPQFLNCKGXHGRL |
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