Gene
| Gene Model ID | pfu_aug1.0_1555.1_58571 |
|---|---|
| Locus | scaffold1555.1 : 28548 ... 35041 : - |
| To GenomeBrowser | scaffold1555.1:28548..35041 |
| Genes list of scaffold | scaffold1555.1 |
| Synonym | pfu_aug2.0_6322.1_09544 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1555.1_58571.t1 | 2 | 1 | Mito_carr | 18 | 124 | 1.5e-33 | 114.3 | 6.8e-25 | 1.0e-20 | 73.2 |
| pfu_aug1.0_1555.1_58571.t1 | 2 | 2 | Mito_carr | 129 | 179 | 1.5e-33 | 114.3 | 2.7e-14 | 4.0e-10 | 39.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1555.1_58571.t1 | gi|14250001|gb|AAH08392.1| | UCP3 protein [Homo sapiens] | 2.0e-36 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1555.1_58571.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1555.1_58571.t1 atgtcttcacagaaggttgacactaagtcctcagatgcaaactttgcctccaaagaatcattatggatcaagatgctaag tgcaggaactgcagcatgttttgcagatatggtcacatttcctcttgatacagcaaaagtcagacttcagattcaaggcc aaggcaagaatttgtttgaccatacgctaatggaatggaataccacaaatgtcccaaaataccgaggcttactgaacacc ctacgtatcatcgtcaaagaagagggcttcctgagtgtctataacggtctggtccctggtctgcaacgacagatgtgctt ctctacgataaggcttggcttatatgatgaagtcaaactgaagtatgctaagttactgtacggaggagaatacagaggtg tgattcactgtgcatattcagtttggaaggaggggaagttaaaagctttctataaaggttttgttccatcctttatgaga ctaggatcctggaatattgtgatgtttatgtgctatgaacagctgaaagcagctatacattatacaacaacttaa |
|
Protein
| Protein ID | pfu_aug1.0_1555.1_58571.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1555.1_58571.t1 MSSQKVDTKSSDANFASKESLWIKMLSAGTAACFADMVTFPLDTAKVRLQIQGQGKNLFDHTLMEWNTTNVPKYRGLLNT LRIIVKEEGFLSVYNGLVPGLQRQMCFSTIRLGLYDEVKLKYAKLLYGGEYRGVIHCAYSVWKEGKLKAFYKGFVPSFMR LGSWNIVMFMCYEQLKAAIHYTTT |
|