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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1562.1_22656
Locus scaffold1562.1 : 83313 ... 87223 : -
To GenomeBrowser scaffold1562.1:83313..87223
Genes list of scaffold scaffold1562.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1562.1_22656.t1 1 1 DDE_3 1 58 1.1e-07 31.7 1.7e-11 1.3e-07 31.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1562.1_22656.t1 gi|307194922|gb|EFN77046.1| Histone-lysine N-methyltransferase SETMAR, partial [Harpegnathos saltator] 2.0e-17

Transcript
Transcript IDpfu_aug1.0_1562.1_22656.t1
Definition-
>pfu_aug1.0_1562.1_22656.t1
gacaatgcttctgttcataagtctgtcactgccatggctgccattcatgtctgtggcttcaatttgattgagcatccacc
ttattcacctgatcttgttccatcagactttcgtctattcccaaaactgaaagcagctatttctggcgcccactttcagt
ctgatgatgacgtcatacttgcagtgggtagctttctgatcattcgagaaaaggaattctttaaaagtggtatcaagacc
cttaaacaccggtggcaaaagtga

Protein
Protein IDpfu_aug1.0_1562.1_22656.t1
Definition-
>pfu_aug1.0_1562.1_22656.t1
DNASVHKSVTAMAAIHVCGFNLIEHPPYSPDLVPSDFRLFPKLKAAISGAHFQSDDDVILAVGSFLIIREKEFFKSGIKT
LKHRWQK

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