Gene
| Gene Model ID | pfu_aug1.0_1564.1_51334 |
|---|---|
| Locus | scaffold1564.1 : 28 ... 10855 : - |
| To GenomeBrowser | scaffold1564.1:28..10855 |
| Genes list of scaffold | scaffold1564.1 |
| Synonym | pfu_aug2.0_3.1_10064 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1564.1_51334.t1 | 3 | 1 | Ferric_reduct | 159 | 199 | 1.2e-11 | 44.7 | 0.057 | 420.0 | 1.0 |
| pfu_aug1.0_1564.1_51334.t1 | 3 | 2 | Ferric_reduct | 249 | 355 | 1.2e-11 | 44.7 | 3.6e-15 | 2.7e-11 | 43.6 |
| pfu_aug1.0_1564.1_51334.t1 | 3 | 3 | Ferric_reduct | 355 | 412 | 1.2e-11 | 44.7 | 0.00098 | 7.2 | 6.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1564.1_51334.t1 | gi|50732453|ref|XP_418643.1| | PREDICTED: metalloreductase STEAP2 isoform X4 [Gallus gallus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1564.1_51334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1564.1_51334.t1 atgactcagattgacctatccgacaatttctacagtaaatctatcaataattctcaattttggcgtcatgtgaatggttt ggattctctgaatataacatctattgaggaatgtgtgcagaccgcctctgtcattcttctagccgttcatgttgaaaatt ataaggactgtatcggggattacgttcctctattctctggtaaaactgtggttgatgtttctaaccgtgccagaaagagt aagaaaacatcaaatgccgaatatttgagttctctccttcccgagtcagtcattgtcaaggcctttaacgtcatttccgc atatgctatggagaatgacagcgcaggaggaagtaagcaagtatacgtggccagcaatgacattgtagctcgagacaaaa tttgtagtatagctcgagatatgggtttcgttgctgtagatctaggtgtacttgcagcatcaaaacagatcgagtctttc ccacttacattgtttccaaactggagaggacctatagctttcaccgtagccacatttaacgtgtggttgctgtatataat gtttatttatttcgtacagcgctccccagctgcttaccgctgggatcagttgtttgtcaaagttctgaacaagccactct gtatgacagcaataactgtacttgcttgtacatacctcccaagctctgttgcggcaattttccaaatgtattatggtaca aagcatattcgatttccagaatggctagaccgatggctgaagtgtcgtaagcagctcggtttgatcgcgtttattcttgt gtttatacatgtgatattctccgttgttataatgagccccacgtattttagatcctggtatcagtctactaccataacca ttcccggaaaccttacggaggatatcaaaataccaatcaaaacatggatgatctggaagggagaggccgccattttagtg ggaactatagctttcgtttgtttatgcataatagctgtctcgactttgccgtccgtaacgaacactcttaactggagaga atggagatgtgttcagtccaagctaggtcacgtgactctatttttatgtgttcttcatgccgccatcatgggtatacctg ggtggataaagtacaatcctgccaaactattccagtcaatcactttcctcagcagtttattgccttatataacgttactc ctgaaaatcattctttcatttccgtgcttcaaccgatatgtcaaaaagattcgacggggatgggaagctagttactcaag gtgtagagcagaatgttctacaaagcattcctctcctggatatatcgtcatgcagaaaaatggacatgtagtgaaggact tgatgggggacgagagagaagccatgataggagaaagattaagtggttgtcaatgtgataatgccagcatcgtttga |
|
Protein
| Protein ID | pfu_aug1.0_1564.1_51334.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1564.1_51334.t1 MTQIDLSDNFYSKSINNSQFWRHVNGLDSLNITSIEECVQTASVILLAVHVENYKDCIGDYVPLFSGKTVVDVSNRARKS KKTSNAEYLSSLLPESVIVKAFNVISAYAMENDSAGGSKQVYVASNDIVARDKICSIARDMGFVAVDLGVLAASKQIESF PLTLFPNWRGPIAFTVATFNVWLLYIMFIYFVQRSPAAYRWDQLFVKVLNKPLCMTAITVLACTYLPSSVAAIFQMYYGT KHIRFPEWLDRWLKCRKQLGLIAFILVFIHVIFSVVIMSPTYFRSWYQSTTITIPGNLTEDIKIPIKTWMIWKGEAAILV GTIAFVCLCIIAVSTLPSVTNTLNWREWRCVQSKLGHVTLFLCVLHAAIMGIPGWIKYNPAKLFQSITFLSSLLPYITLL LKIILSFPCFNRYVKKIRRGWEASYSRCRAECSTKHSSPGYIVMQKNGHVVKDLMGDEREAMIGERLSGCQCDNASIV |
|