Gene
| Gene Model ID | pfu_aug1.0_1567.1_58573 |
|---|---|
| Locus | scaffold1567.1 : 28475 ... 66005 : - |
| To GenomeBrowser | scaffold1567.1:28475..66005 |
| Genes list of scaffold | scaffold1567.1 |
| Synonym | pfu_aug2.0_4.1_13361 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1567.1_58573.t1 | 1 | 1 | Pkinase | 69 | 321 | 0.0 | 224.3 | 0.0 | 0.0 | 224.0 |
| pfu_aug1.0_1567.1_58573.t1 | 1 | 1 | Pkinase_Tyr | 70 | 304 | 3.5e-32 | 111.5 | 9.5e-36 | 4.7e-32 | 111.0 |
| pfu_aug1.0_1567.1_58573.t1 | 1 | 1 | Kinase-like | 161 | 304 | 3.9e-07 | 29.3 | 1.3e-10 | 6.2e-07 | 28.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1567.1_58573.t1 | gi|321467781|gb|EFX78769.1| | hypothetical protein DAPPUDRAFT_319998 [Daphnia pulex] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1567.1_58573.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1567.1_58573.t1 atggcggacattatacataagatatttggtcccaaacacaaggaagggaagcatcacgatgcctcgggtagtaaggccga tacagaggccctggccaagcagcaaacagaattcttcaaggaattcttggcgaaagctaaagaggagttttcagggaaat gggatcatcctgcacagaacaccgcctgtttagatgactttgacagaatcaagaccctggggacggggtcatttggtcgg gttatgctcgtccaacacaaagccaataaagaattctatgccatgaaaattctagataaacagaaggttgtcaaattaaa acaagtagaacatacactgaatgagaagagaatcctacaagccatcaacttcccattccttgttagtctagaatatcatt ttaaggacaattcaaatctctacatggtgctcgagtttgtaacaggaggtgaaatgttctcacatttaagacgtattggc agatttagtgagccccactccagattttatgcagcacaaatagttttggcatttgaatatcttcattatttagatctcat atatagagatctcaaaccagagaatttacttatagactctcatggataccttaaagtgacagattttggatttgcaaaga aggtgaagggaaggacctggactctgtgtggaactccagaatacctggcaccagaaatcattctcagcaagggatacaac aaggcagttgattggtgggcattaggtgtattagtatatgagatggcagcagggtatcccccgttctttgctgatcagcc aattcagatatatgaaaaaattgtctctggaaaggtacgatttccctcacacttcagccatgacttaaaagaccttctac gttacttactacaagtggacctcacaaaacgctatggcaatctcaaaaatggagtcaacgatattaaaaatcataaatgg ttctcagctactgactggattgctatatatcaaagaaaggtaaaatttaaaaagtgttcaaaatcttcatacatacaatt ttcatacataaatccaaactttcataagatatcacaatttccttcttttcgaaataactag |
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Protein
| Protein ID | pfu_aug1.0_1567.1_58573.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1567.1_58573.t1 MADIIHKIFGPKHKEGKHHDASGSKADTEALAKQQTEFFKEFLAKAKEEFSGKWDHPAQNTACLDDFDRIKTLGTGSFGR VMLVQHKANKEFYAMKILDKQKVVKLKQVEHTLNEKRILQAINFPFLVSLEYHFKDNSNLYMVLEFVTGGEMFSHLRRIG RFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLKPENLLIDSHGYLKVTDFGFAKKVKGRTWTLCGTPEYLAPEIILSKGYN KAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSHDLKDLLRYLLQVDLTKRYGNLKNGVNDIKNHKW FSATDWIAIYQRKVKFKKCSKSSYIQFSYINPNFHKISQFPSFRNN |
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