Gene
| Gene Model ID | pfu_aug1.0_15692.1_18245 |
|---|---|
| Locus | scaffold15692.1 : 1 ... 12632 : - |
| To GenomeBrowser | scaffold15692.1:1..12632 |
| Genes list of scaffold | scaffold15692.1 |
| Synonym | pfu_aug2.0_275.1_17233 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15692.1_18245.t1 | 4 | 1 | Agenet | 79 | 109 | 6.8e-06 | 26.1 | 0.17 | 310.0 | 1.5 |
| pfu_aug1.0_15692.1_18245.t1 | 4 | 1 | TUDOR | 81 | 136 | 0.0 | 204.7 | 2.0e-16 | 3.7e-13 | 49.3 |
| pfu_aug1.0_15692.1_18245.t1 | 4 | 2 | TUDOR | 252 | 344 | 0.0 | 204.7 | 4.0e-12 | 7.5e-09 | 35.4 |
| pfu_aug1.0_15692.1_18245.t1 | 4 | 2 | Agenet | 315 | 340 | 6.8e-06 | 26.1 | 0.94 | 1700.0 | -0.8 |
| pfu_aug1.0_15692.1_18245.t1 | 4 | 3 | TUDOR | 423 | 487 | 0.0 | 204.7 | 2.5e-14 | 4.7e-11 | 42.5 |
| pfu_aug1.0_15692.1_18245.t1 | 4 | 3 | Agenet | 439 | 459 | 6.8e-06 | 26.1 | 0.083 | 150.0 | 2.5 |
| pfu_aug1.0_15692.1_18245.t1 | 4 | 4 | TUDOR | 558 | 673 | 0.0 | 204.7 | 3.2e-26 | 5.9e-23 | 81.0 |
| pfu_aug1.0_15692.1_18245.t1 | 4 | 4 | Agenet | 619 | 657 | 6.8e-06 | 26.1 | 3.7e-06 | 0.0068 | 16.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15692.1_18245.t1 | gi|291234145|ref|XP_002737010.1| | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_15692.1_18245.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15692.1_18245.t1 tgtccaaacccagccagtgccgtccctgaggtcacctactggaggcacctcacaaaggtcaccagctggtgctactggaa gtcagaaaacaccacaaaagtcacccaggatggcagctgaacaaaaaccttctatacctcccacaaaattaccgatggga aatgaagttgatatatacaatcaggatcatacacaagtatcctgcccggctgtaggagatttcctggtgggtaactttat gggaaactggtatcgtctccaggtcaatcaagttatctccacggacaagttccaggttacctacgtagattacgggaata aagaaacggtcagcttggctgagctgagataccttaaacctgacatgtgcatgatacctgcacaggcaatagaatgctgc cttgatggtataagtgatcctaactggagccctgccagcatagagcgtgtgaaggaattggtacccccgactgtcactgc cggtgtcctgtataaggcgaaagctgtgaaagatgatggaaacattacaagtattaaactaacagatggaaacggggatg atgtaggcaataaattactgagtgagggacttgttggaagaggtgtccaaactcagcaggtgccatccctgaagtcacca gtaggtggcgcctcacaaaggtcaccagcaagtgccactggaggtcagaggttatcacaggggtcaattacaacagtggc agaacagagatcacttataccatcaacaaatctacccatagggtctgaagtagatgtgatagtgttggctgtaacaagtc cagggagtatagtagtacaggtgtttgaccacgagatggtacaggctgctgtagatcaggacgctagaatgacggagata tacaatcaggatcatacacaagtatcctgcccggctgtaggagatttcctggtgggtaactatatgggaaactggtatcg tctccaggtcaatcaagttatctcccctgacaagttccaggttacctacgtagattacggcaataaagaaacggccatag aatgttgcctggagggaataggtgatcctaactggagccctgccagtatagagcgtatcaaggaattggtaccaccgacc ctcacagctggagtattatacaaggcaaaggctgtaagaatggagggaaacctttcatgcataaaactactagatggaaa tggagtggatataggagatacattgttgagtgagggacttgtatcaacggcagggaagaaaaggcctcagtgtgtaggag agttggtagtgggtagattctcaggtgatcagatgtggtacagggctgaagtcttagctctaactgacaccaacgccaca ctgtgttatgtcgacttcggcaacaaagaacaagtgccgtttacaagtataagacatgccgttgaaatctgtactagact gcccatacagagttttgtttgtgttcctgttaatcagtgttcattagagcaggctgtgaaaattagtgctgtggtcaaga aaaaagaaaattcagaagtactgatacagatacaagatgccatggcattgacgtcagaaaacacggaagaaactgtacaa aaagtagagaatgcaacacctagaaaaataatgtactctgatattcagaaaatacagctacctgtgaatggcagtaaggt tgccatgacattttcagacgccagcagtttgtattcgtttcaccttagaaagtgtgattctgagagtcaggccgagttgg acaaggtcatgaaagacgtgcatgaatactgtacaaagaacgtggatccatataaaccggaggtgaacgagatggtatgt gttcagttttctgcagatggtgcatggtatcgtggtcgagtcaccaacatagagggtgatgcgtattctgttcagtacgt ggatcatggaaattcggagaatgtttcaataaaagccatacggaagattgatcctagcctacttgttacgcctctacagt ccgttcactgtcgagtagcggaaattatgctctatacccatgacctgttcatgca |
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Protein
| Protein ID | pfu_aug1.0_15692.1_18245.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15692.1_18245.t1 VQTQPVPSLRSPTGGTSQRSPAGATGSQKTPQKSPRMAAEQKPSIPPTKLPMGNEVDIYNQDHTQVSCPAVGDFLVGNFM GNWYRLQVNQVISTDKFQVTYVDYGNKETVSLAELRYLKPDMCMIPAQAIECCLDGISDPNWSPASIERVKELVPPTVTA GVLYKAKAVKDDGNITSIKLTDGNGDDVGNKLLSEGLVGRGVQTQQVPSLKSPVGGASQRSPASATGGQRLSQGSITTVA EQRSLIPSTNLPIGSEVDVIVLAVTSPGSIVVQVFDHEMVQAAVDQDARMTEIYNQDHTQVSCPAVGDFLVGNYMGNWYR LQVNQVISPDKFQVTYVDYGNKETAIECCLEGIGDPNWSPASIERIKELVPPTLTAGVLYKAKAVRMEGNLSCIKLLDGN GVDIGDTLLSEGLVSTAGKKRPQCVGELVVGRFSGDQMWYRAEVLALTDTNATLCYVDFGNKEQVPFTSIRHAVEICTRL PIQSFVCVPVNQCSLEQAVKISAVVKKKENSEVLIQIQDAMALTSENTEETVQKVENATPRKIMYSDIQKIQLPVNGSKV AMTFSDASSLYSFHLRKCDSESQAELDKVMKDVHEYCTKNVDPYKPEVNEMVCVQFSADGAWYRGRVTNIEGDAYSVQYV DHGNSENVSIKAIRKIDPSLLVTPLQSVHCRVAEIMLYTHDLFM |
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