Gene
Gene Model ID | pfu_aug1.0_157.1_00170 |
---|---|
Locus | scaffold157.1 : 6065 ... 15455 : - |
To GenomeBrowser | scaffold157.1:6065..15455 |
Genes list of scaffold | scaffold157.1 |
Synonym | pfu_aug2.0_276.1_20548 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_157.1_00170.t1 | 2 | 1 | Borrelia_P83 | 14 | 277 | 1.5e-14 | 53.1 | 3.0e-18 | 1.5e-14 | 53.1 |
pfu_aug1.0_157.1_00170.t1 | 1 | 1 | MAP7 | 104 | 254 | 7.9e-16 | 57.9 | 1.6e-19 | 7.9e-16 | 57.9 |
pfu_aug1.0_157.1_00170.t1 | 2 | 2 | Borrelia_P83 | 303 | 410 | 1.5e-14 | 53.1 | 0.023 | 110.0 | 0.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
Dshape | 2 |
Transcript
Transcript ID | pfu_aug1.0_157.1_00170.t1 |
---|---|
Definition | - |
>pfu_aug1.0_157.1_00170.t1 atggccgtgtctgtacagagggagttagaggagaagggggcggtagagcttcagtcaccggaggagaaagaggttactgt aacagaggagggagtagaccttccacaggatcaagtctctcaacaagttccacatgaaactgaggactctgagggagata ttcccagaacagtaacaccagatcaagatacaatagaccgtgctatctcacctcctgccaaacctgaaagaactcccact ccaactcgtctggaatccaagtcatctccggccaaacagagggcagcaccagccaccggctcagccacatcgactccaaa taaaagccagaaggagcaggagctggaggagtacaaggccaaactggctgagaagaggagacaagccagggagaaggctg agagggaggctgagctggagagacagaggcaggaggaacttaggctacaggaggaagagaggattcgtaaagaggaggag gagcagaggaaggctgaggaggaggctcagagactagccgctctagctaaggaggcagaggaagaaaggctacgtaaagc tatagaggcagaggaggagaggaggaaacaagaggctgaaaaggcagaacaggaaaagaaaatgaaagaagaagccgaga ggaaggctaaagaagaagcagagagggcagagaaagagagaattgagaaagccaagcgagacgaagaggaaagacaggag agaaagaagagattagaatcaataatgaagagggtcaaatcagattcccccatgacagcctcagcatccacagacagctt aaagaatgatacaatgagctcttccatgaccggatccttgtctaagatttactcgtcaagtgaaaacttactggaggaga aaaaggataaggagaatggtgtgacgtttaatttggaagactccgatgccgagaaagataaattacaaactccaaccact ggtgcttcaaagttcaaatcacctttacttcaaaaactcgttgaaaataaaccatctcaaaatggtggaagtgaaacacc aaaattcaaatctccattattacaaagcctgttgggtaaaaaatctcgacgaggcttagataaaacagacggtgataaat ctgacagtgaagggctttcagatagtgaaaaagtagacgatgtacatagtgactcaaaattagagagtgcaactgaacaa aaacaagagagttccactaaggtggagataactcctgatcctagtagtatagaaagtgaagatagtagtgctggcacaga tagtagaactgacttatgtgatgatgatactgtgataactaagggagataaatctgtacagaatggttgtgtacataacg gtgagacgtcacatcatgagcttgttgactcaagtataagcatgaggacgattgattcttctataacaacggacgattct gtgagtggaagcctaatagactctcaatcacaggcggaatctggtctcagcgccagacaacaagaacctttcgaggaata catagacttgagtgtcagtaataaaggggtggatgtgcattcatcatcatacggcaactctgacgacttgttaaacttta acacccgtcatagtttggataatagagacgctggggaggagattatacctaaacccatcattgccttcgaggacaatgca accagacgtcaagaagtctcagactacctatcatga |
Protein
Protein ID | pfu_aug1.0_157.1_00170.t1 |
---|---|
Definition | - |
>pfu_aug1.0_157.1_00170.t1 MAVSVQRELEEKGAVELQSPEEKEVTVTEEGVDLPQDQVSQQVPHETEDSEGDIPRTVTPDQDTIDRAISPPAKPERTPT PTRLESKSSPAKQRAAPATGSATSTPNKSQKEQELEEYKAKLAEKRRQAREKAEREAELERQRQEELRLQEEERIRKEEE EQRKAEEEAQRLAALAKEAEEERLRKAIEAEEERRKQEAEKAEQEKKMKEEAERKAKEEAERAEKERIEKAKRDEEERQE RKKRLESIMKRVKSDSPMTASASTDSLKNDTMSSSMTGSLSKIYSSSENLLEEKKDKENGVTFNLEDSDAEKDKLQTPTT GASKFKSPLLQKLVENKPSQNGGSETPKFKSPLLQSLLGKKSRRGLDKTDGDKSDSEGLSDSEKVDDVHSDSKLESATEQ KQESSTKVEITPDPSSIESEDSSAGTDSRTDLCDDDTVITKGDKSVQNGCVHNGETSHHELVDSSISMRTIDSSITTDDS VSGSLIDSQSQAESGLSARQQEPFEEYIDLSVSNKGVDVHSSSYGNSDDLLNFNTRHSLDNRDAGEEIIPKPIIAFEDNA TRRQEVSDYLS |