Gene
| Gene Model ID | pfu_aug1.0_157.1_00170 |
|---|---|
| Locus | scaffold157.1 : 6065 ... 15455 : - |
| To GenomeBrowser | scaffold157.1:6065..15455 |
| Genes list of scaffold | scaffold157.1 |
| Synonym | pfu_aug2.0_276.1_20548 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_157.1_00170.t1 | 2 | 1 | Borrelia_P83 | 14 | 277 | 1.5e-14 | 53.1 | 3.0e-18 | 1.5e-14 | 53.1 |
| pfu_aug1.0_157.1_00170.t1 | 1 | 1 | MAP7 | 104 | 254 | 7.9e-16 | 57.9 | 1.6e-19 | 7.9e-16 | 57.9 |
| pfu_aug1.0_157.1_00170.t1 | 2 | 2 | Borrelia_P83 | 303 | 410 | 1.5e-14 | 53.1 | 0.023 | 110.0 | 0.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 2 |
Transcript
| Transcript ID | pfu_aug1.0_157.1_00170.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_157.1_00170.t1 atggccgtgtctgtacagagggagttagaggagaagggggcggtagagcttcagtcaccggaggagaaagaggttactgt aacagaggagggagtagaccttccacaggatcaagtctctcaacaagttccacatgaaactgaggactctgagggagata ttcccagaacagtaacaccagatcaagatacaatagaccgtgctatctcacctcctgccaaacctgaaagaactcccact ccaactcgtctggaatccaagtcatctccggccaaacagagggcagcaccagccaccggctcagccacatcgactccaaa taaaagccagaaggagcaggagctggaggagtacaaggccaaactggctgagaagaggagacaagccagggagaaggctg agagggaggctgagctggagagacagaggcaggaggaacttaggctacaggaggaagagaggattcgtaaagaggaggag gagcagaggaaggctgaggaggaggctcagagactagccgctctagctaaggaggcagaggaagaaaggctacgtaaagc tatagaggcagaggaggagaggaggaaacaagaggctgaaaaggcagaacaggaaaagaaaatgaaagaagaagccgaga ggaaggctaaagaagaagcagagagggcagagaaagagagaattgagaaagccaagcgagacgaagaggaaagacaggag agaaagaagagattagaatcaataatgaagagggtcaaatcagattcccccatgacagcctcagcatccacagacagctt aaagaatgatacaatgagctcttccatgaccggatccttgtctaagatttactcgtcaagtgaaaacttactggaggaga aaaaggataaggagaatggtgtgacgtttaatttggaagactccgatgccgagaaagataaattacaaactccaaccact ggtgcttcaaagttcaaatcacctttacttcaaaaactcgttgaaaataaaccatctcaaaatggtggaagtgaaacacc aaaattcaaatctccattattacaaagcctgttgggtaaaaaatctcgacgaggcttagataaaacagacggtgataaat ctgacagtgaagggctttcagatagtgaaaaagtagacgatgtacatagtgactcaaaattagagagtgcaactgaacaa aaacaagagagttccactaaggtggagataactcctgatcctagtagtatagaaagtgaagatagtagtgctggcacaga tagtagaactgacttatgtgatgatgatactgtgataactaagggagataaatctgtacagaatggttgtgtacataacg gtgagacgtcacatcatgagcttgttgactcaagtataagcatgaggacgattgattcttctataacaacggacgattct gtgagtggaagcctaatagactctcaatcacaggcggaatctggtctcagcgccagacaacaagaacctttcgaggaata catagacttgagtgtcagtaataaaggggtggatgtgcattcatcatcatacggcaactctgacgacttgttaaacttta acacccgtcatagtttggataatagagacgctggggaggagattatacctaaacccatcattgccttcgaggacaatgca accagacgtcaagaagtctcagactacctatcatga |
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Protein
| Protein ID | pfu_aug1.0_157.1_00170.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_157.1_00170.t1 MAVSVQRELEEKGAVELQSPEEKEVTVTEEGVDLPQDQVSQQVPHETEDSEGDIPRTVTPDQDTIDRAISPPAKPERTPT PTRLESKSSPAKQRAAPATGSATSTPNKSQKEQELEEYKAKLAEKRRQAREKAEREAELERQRQEELRLQEEERIRKEEE EQRKAEEEAQRLAALAKEAEEERLRKAIEAEEERRKQEAEKAEQEKKMKEEAERKAKEEAERAEKERIEKAKRDEEERQE RKKRLESIMKRVKSDSPMTASASTDSLKNDTMSSSMTGSLSKIYSSSENLLEEKKDKENGVTFNLEDSDAEKDKLQTPTT GASKFKSPLLQKLVENKPSQNGGSETPKFKSPLLQSLLGKKSRRGLDKTDGDKSDSEGLSDSEKVDDVHSDSKLESATEQ KQESSTKVEITPDPSSIESEDSSAGTDSRTDLCDDDTVITKGDKSVQNGCVHNGETSHHELVDSSISMRTIDSSITTDDS VSGSLIDSQSQAESGLSARQQEPFEEYIDLSVSNKGVDVHSSSYGNSDDLLNFNTRHSLDNRDAGEEIIPKPIIAFEDNA TRRQEVSDYLS |
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