Gene
| Gene Model ID | pfu_aug1.0_157.1_00176 |
|---|---|
| Locus | scaffold157.1 : 141737 ... 151295 : - |
| To GenomeBrowser | scaffold157.1:141737..151295 |
| Genes list of scaffold | scaffold157.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_157.1_00176.t1 | 1 | 1 | ANF_receptor | 35 | 107 | 5.8e-07 | 28.6 | 1.8e-10 | 8.9e-07 | 28.0 |
| pfu_aug1.0_157.1_00176.t1 | 1 | 1 | Lig_chan-Glu_bd | 195 | 255 | 4.6e-18 | 64.9 | 1.8e-21 | 9.0e-18 | 64.0 |
| pfu_aug1.0_157.1_00176.t1 | 1 | 1 | SBP_bac_3 | 245 | 294 | 1.0e-10 | 41.2 | 5.4e-14 | 2.7e-10 | 39.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_157.1_00176.t1 | gi|91090776|ref|XP_969654.1| | PREDICTED: glutamate [NMDA] receptor subunit 1 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_157.1_00176.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_157.1_00176.t1 atggatgaagagggaagaatgattctcagtaggtttcaagctaaagccgatcagaaagacattacgttgataaacggtac gaatgaggaggttcacatacaggacagtgtaaagctggtaggcaatgctatcagtaaactattccaactaggaaatctga ctagtatatccaatactcctaacaactgtagtaaacctcacaaaacatggagggatggaaaaactatactcgatgcactg aaatacgagaagataagtggaattacgggacaggtcagctttaacaatgatggagataggctgaatcctctgtacttcat caaaaatgtacaacctgccaacaaaattactgaaattggttactatggaaacaaacaggtttcatcaccatacattgaca tagacaattctaagataatatgggctggaggtagtcgtacaatacctgacggaatcaaaatatcacgccatcttaaggta gttactctacagtataagccgtttgtatggacacggctttcccctgatggcacatgtcatgaggatcgtaaggagagact ctgtccgttctacaatgctacaacaggaaacacaacaaattactgttgttatggctactgtatagaaatgctgatcgaca ttgctgagagtgtgaacttcacatttagtttacatcaaagtccgagtgaggcttttggctcatacaaaaagaaagctgga tccaatgagaaggaatggaatggcatgataggggaggtaatccgtggtgaatcagatatgattgtagcccctttgaccat taatccagagagggccgactttatagacttctccaagcctttcaagtatcagggtctaacaatcttagtgaaaaagcgca tgcagcgtgtccgctcggatttttcatttagtcacctacctaaagcattgttcaaaacttgggcaccttctctgcccaag taa |
|
Protein
| Protein ID | pfu_aug1.0_157.1_00176.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_157.1_00176.t1 MDEEGRMILSRFQAKADQKDITLINGTNEEVHIQDSVKLVGNAISKLFQLGNLTSISNTPNNCSKPHKTWRDGKTILDAL KYEKISGITGQVSFNNDGDRLNPLYFIKNVQPANKITEIGYYGNKQVSSPYIDIDNSKIIWAGGSRTIPDGIKISRHLKV VTLQYKPFVWTRLSPDGTCHEDRKERLCPFYNATTGNTTNYCCYGYCIEMLIDIAESVNFTFSLHQSPSEAFGSYKKKAG SNEKEWNGMIGEVIRGESDMIVAPLTINPERADFIDFSKPFKYQGLTILVKKRMQRVRSDFSFSHLPKALFKTWAPSLPK |
|