Gene
| Gene Model ID | pfu_aug1.0_15746.1_39740 |
|---|---|
| Locus | scaffold15746.1 : 2765 ... 17775 : - |
| To GenomeBrowser | scaffold15746.1:2765..17775 |
| Genes list of scaffold | scaffold15746.1 |
| Synonym | pfu_aug2.0_604.1_14372 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15746.1_39740.t1 | 1 | 1 | WW | 16 | 45 | 1.3e-07 | 31.3 | 9.2e-11 | 2.3e-07 | 30.5 |
| pfu_aug1.0_15746.1_39740.t1 | 1 | 1 | adh_short | 84 | 217 | 5.4e-17 | 62.2 | 3.2e-20 | 7.8e-17 | 61.6 |
| pfu_aug1.0_15746.1_39740.t1 | 2 | 1 | KR | 84 | 173 | 1.1e-08 | 34.9 | 1.2e-11 | 3.1e-08 | 33.5 |
| pfu_aug1.0_15746.1_39740.t1 | 2 | 2 | KR | 199 | 220 | 1.1e-08 | 34.9 | 0.39 | 970.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15746.1_39740.t1 | gi|297284523|ref|XP_001105944.2| | PREDICTED: WW domain-containing oxidoreductase-like [Macaca mulatta] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15746.1_39740.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15746.1_39740.t1 atggcatcatccaactacagggaagaaaaagaagttaaaggagatttgccatatggatgggaaaagaaagtttctgatga gggactggtgttctatgtggaccatatcaataaaaagacgacttacacagatccacgtctggcctttgctgaggacgtga agaagaatccatacgactttaaacagaagtttgatggtaacagcacggccatgcaggtagttctagggaaggatctaacc ggtacttatgttgtcgtcactggcgcaaactctggaataggttttgagacagcacgtaccttagcactgtatggagccac cgttatacttgcatgtcggaatcttgattcagcggagaaaagtcgtcagagtattcttcaggagaggtcgcaggccaaag tggaggtgatgcatcttgatctggcttcattacgtagtgtaaagatgtttgctgatgagtacagatctaaacaatggccc ttacatctcctgatacttaatgctgctgtgtttggcttgccatacacaaggacagaggacgatctagaaatcacattcca agtaaatcacctgtcacatttctacctgaccaagctactgtgggagacgttagtccagtcacagccggcacgtgttatcg tattaacttcagagtctcacagatttacagacttatcattagataatctttcggaggagaaactttcaccaacagcgggt aaatactctgatctaaagatgtacaacatcagtaagctacttaacgtgctcttctcacttcatcttgagaagctcctcgg catgcagggtgtacacagcatctctgtacatcctggtaactgtatgaacacaagtcttagccgatactggtggctgtaca gaatcttcttcttcctggctagtccttttactaagtcaatggccttttctatttataccaatttttcatcttaa |
|
Protein
| Protein ID | pfu_aug1.0_15746.1_39740.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15746.1_39740.t1 MASSNYREEKEVKGDLPYGWEKKVSDEGLVFYVDHINKKTTYTDPRLAFAEDVKKNPYDFKQKFDGNSTAMQVVLGKDLT GTYVVVTGANSGIGFETARTLALYGATVILACRNLDSAEKSRQSILQERSQAKVEVMHLDLASLRSVKMFADEYRSKQWP LHLLILNAAVFGLPYTRTEDDLEITFQVNHLSHFYLTKLLWETLVQSQPARVIVLTSESHRFTDLSLDNLSEEKLSPTAG KYSDLKMYNISKLLNVLFSLHLEKLLGMQGVHSISVHPGNCMNTSLSRYWWLYRIFFFLASPFTKSMAFSIYTNFSS |
|