Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_157660.1_42814
Locus scaffold157660.1 : 1 ... 915 : -
To GenomeBrowser scaffold157660.1:1..915
Genes list of scaffold scaffold157660.1
Synonym NA

Manual annotation
Study fieldBiomineralization
Gene namePif 177
DescriptionPif177 (Pif 80) partial sequence, best hit to BLAST BAH97338.1
mRNA evidence

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
mantleEdge 1
mantlePallium 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_157660.1_42814.t1
Definition-
>pfu_aug1.0_157660.1_42814.t1
gtgtacatttacttttgcgaccctggcaaagaggccgattacgatgatgaagatgatgatgacgacgatgatgatagtga
tgaaaatgataagaatgacgataaaaaagatggcaagaaaaccgatgacaaagacaaaaaagacagaaaagatggagaga
tgacaggaaagatggtagagatgacaggaaagatagaagagatgacaggaaagatgataggaaaggtggtaaagatgata
ggaaagatgataggaaaggtggtaaagatgacaggaaagatggtagagatgttagagatgatagagatcgagtag

Protein
Protein IDpfu_aug1.0_157660.1_42814.t1
Definition-
>pfu_aug1.0_157660.1_42814.t1
VYIYFCDPGKEADYDDEDDDDDDDDSDENDKNDDKKDGKKTDDKDKKDRKDGEMTGKMVEMTGKIEEMTGKMIGKVVKMI
GKMIGKVVKMTGKMVEMLEMIEIE

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