Gene
| Gene Model ID | pfu_aug1.0_158.1_36320 |
|---|---|
| Locus | scaffold158.1 : 84708 ... 94475 : - |
| To GenomeBrowser | scaffold158.1:84708..94475 |
| Genes list of scaffold | scaffold158.1 |
| Synonym | pfu_aug2.0_660.1_01019 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_158.1_36320.t1 | 1 | 1 | Tyrosinase | 7 | 152 | 2.5e-26 | 93.2 | 5.0e-29 | 7.4e-25 | 88.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_158.1_36320.t1 | gi|193202602|ref|NP_492055.2| | TYR-3 [Caenorhabditis elegans] | 9.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 3 |
Transcript
| Transcript ID | pfu_aug1.0_158.1_36320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_158.1_36320.t1 atgattggatcaatcatcggcctattcgaaaatgccttacgacagaaagtacccacagtgacgttaccatactgggactc aacaatggacgaagccatgatagattctacccaatcaaatctatggaccccggaatttataggaaacggaaatggtatag taaacaacggacccttcgcgttctggcaaactccgaatggtccgttgattcgtaacatcggcaatgcaggcggagagttg ttctccagagatgctatcttcagtatcttgtccagaaatcgcatggctcaaattacagagccagcggctcccgaccagtt taatatcgagaactatcacggaaatgttcacacgtggttaggaggtcaaatggaaccaatggaaacgtcagcatttgacc ccgttttctacctgcatcatgcttttgtggactatgtatacgaacttttccgacagcgacaaattgcccaaggtatagat ccgactcaagactacccggcaaattacggagccgagacgcatgcgccgcttacacctactggctttggaaacttaccaaa tgcgtttggaatgaatcctttgtttacctcagatatctacatataccagcctaacccaacttgctcataccagaatccaa actgtggctccaggcatttaacctgtgacatatctacaggtgtgcctctttgtatccctatagctgttggccctcccaga attttaccccctggtcctggacaagcgggcccagcagaagctttcggcatagggccaggtgttccagatgccggttttgg cggacaagcacctccaatattcggtagaaagaagcgacaagccactaggtcaacctatccgattgattcttcacaattcc caacatgtactggtacatggctctctttctctagtcagaacacattcgagatagatcaggttgctgataccagaaactgg gttttcattccggtccggatcgtcacgaaaagaacaccagaacatagggctttcaacgcttacccaatcattgatggata cgcagcaaagaagaaggacatctacgaccctgaattataccaagagattaagccgtatttctcagagtcggtcatgccag cgtcgacaaaatgcaagtccatcacgggtggtcgaacagttggaagggttcatattagatcagatggaatgaattatcag ggaaactacgatgaatatgtagttgttgatctgaggcaagcattttcagaatcaatcacttacgtagcactcaaaaatcc taacaaaggcgcaacggaagtcctggtatctgcatttgattcttgcggaaggaaatgcacggcatattgcagagaccgga ataaaggcggatatcataaatgttccggagctctacgtgtaaataatgacacaccttgggaatatggtaaaaactacggt gatgctgtgcgcatgtcttgggatttaaacgatatgaacactattcccgaactacaagatcagtctgttttcatacaatt ttactgcagtcacaccagtgaatag |
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Protein
| Protein ID | pfu_aug1.0_158.1_36320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_158.1_36320.t1 MIGSIIGLFENALRQKVPTVTLPYWDSTMDEAMIDSTQSNLWTPEFIGNGNGIVNNGPFAFWQTPNGPLIRNIGNAGGEL FSRDAIFSILSRNRMAQITEPAAPDQFNIENYHGNVHTWLGGQMEPMETSAFDPVFYLHHAFVDYVYELFRQRQIAQGID PTQDYPANYGAETHAPLTPTGFGNLPNAFGMNPLFTSDIYIYQPNPTCSYQNPNCGSRHLTCDISTGVPLCIPIAVGPPR ILPPGPGQAGPAEAFGIGPGVPDAGFGGQAPPIFGRKKRQATRSTYPIDSSQFPTCTGTWLSFSSQNTFEIDQVADTRNW VFIPVRIVTKRTPEHRAFNAYPIIDGYAAKKKDIYDPELYQEIKPYFSESVMPASTKCKSITGGRTVGRVHIRSDGMNYQ GNYDEYVVVDLRQAFSESITYVALKNPNKGATEVLVSAFDSCGRKCTAYCRDRNKGGYHKCSGALRVNNDTPWEYGKNYG DAVRMSWDLNDMNTIPELQDQSVFIQFYCSHTSE |
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