Gene
| Gene Model ID | pfu_aug1.0_1581.1_51340 |
|---|---|
| Locus | scaffold1581.1 : 24852 ... 39165 : - |
| To GenomeBrowser | scaffold1581.1:24852..39165 |
| Genes list of scaffold | scaffold1581.1 |
| Synonym | pfu_aug2.0_134.1_13667 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1581.1_51340.t1 | 1 | 1 | Exostosin | 86 | 219 | 4.7e-24 | 84.9 | 1.1e-27 | 8.0e-24 | 84.2 |
| pfu_aug1.0_1581.1_51340.t1 | 1 | 1 | Glyco_transf_64 | 233 | 314 | 1.9e-32 | 112.4 | 3.7e-36 | 2.8e-32 | 111.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1581.1_51340.t1 | gi|157820411|ref|NP_001101221.1| | exostosin-2 [Rattus norvegicus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1581.1_51340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1581.1_51340.t1 atgcttaaattaaagctacggtacaccatatgtattgcatgtcttctgttggtttccatcataatcctgttgctgccata tctcaactcgaacgagggcaagcaagaggagaggagaaccctccatgcctggcagcaaacagaggggcaacagactatag acctgcttgccatgcgcgtcaactcgacaaaaagggatacaagatgtacatatcatacatgttttgacgtcttcaattgt ggatataatgataggaagacgattaccgtctatatttaccccccaactcagtatacagatgcagacggttccagtctcac cacacccataagtcaggaattccaagaaatcctggaaaccatcgctgatagtccgttctacactgacgatccaacacggg cgtgcctgtacgtgccagccttcgatacgttgaaccagaataccgtgaggcaagatgaaataggccagttgtatgcactc ttgccatggtggaacagtggtacaaatcacctcatatttaacatgctgcctggaagtatgccagactatagtaccgtcct ggaggtgaatacaggaaaagctgtcttagcgggcggtggattctccacatggtcttatagacgtacctttgatgtttcta tacccgtttataatccacttctggattacagcgtcattcggcaaaagtcgtacttattcttcccataccatgaaatagac acagagtgtatcttggccttagatgatgatatagtcatgttgacttcagatgaactcgagtttggttatgaggtgtggag agagtttccagaccggcttgttggtttcccttcacgagtacatctgtgggataactctactaccaagtggagatacgagt ccgagtggactaacgcaatatctatggtgctaactggtgctgcattttaccacaagatatggtattcaaattctgtgatt cattgcttaattataccaacttttgaaagttatgaaatgtcaaatatgaaagatagaaaagaagacaatgatgaatttga aaaaaaaaacaattttgcatgtacatgtaaccaggattttcatcggcttaaaagttga |
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Protein
| Protein ID | pfu_aug1.0_1581.1_51340.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1581.1_51340.t1 MLKLKLRYTICIACLLLVSIIILLLPYLNSNEGKQEERRTLHAWQQTEGQQTIDLLAMRVNSTKRDTRCTYHTCFDVFNC GYNDRKTITVYIYPPTQYTDADGSSLTTPISQEFQEILETIADSPFYTDDPTRACLYVPAFDTLNQNTVRQDEIGQLYAL LPWWNSGTNHLIFNMLPGSMPDYSTVLEVNTGKAVLAGGGFSTWSYRRTFDVSIPVYNPLLDYSVIRQKSYLFFPYHEID TECILALDDDIVMLTSDELEFGYEVWREFPDRLVGFPSRVHLWDNSTTKWRYESEWTNAISMVLTGAAFYHKIWYSNSVI HCLIIPTFESYEMSNMKDRKEDNDEFEKKNNFACTCNQDFHRLKS |
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