Gene
| Gene Model ID | pfu_aug1.0_1583.1_58579 |
|---|---|
| Locus | scaffold1583.1 : 149 ... 14199 : + |
| To GenomeBrowser | scaffold1583.1:149..14199 |
| Genes list of scaffold | scaffold1583.1 |
| Synonym | pfu_aug2.0_14625.1_19850 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1583.1_58579.t1 | 3 | 1 | Peptidase_C2 | 39 | 169 | 4.99997e-41 | 140.6 | 7.7e-33 | 2.3e-29 | 102.3 |
| pfu_aug1.0_1583.1_58579.t1 | 3 | 2 | Peptidase_C2 | 170 | 243 | 4.99997e-41 | 140.6 | 1.4e-12 | 4.2e-09 | 35.8 |
| pfu_aug1.0_1583.1_58579.t1 | 1 | 1 | Calpain_III | 234 | 338 | 1.3e-19 | 70.2 | 8.7e-23 | 2.6e-19 | 69.3 |
| pfu_aug1.0_1583.1_58579.t1 | 3 | 3 | Peptidase_C2 | 307 | 376 | 4.99997e-41 | 140.6 | 0.66 | 1900.0 | -2.5 |
| pfu_aug1.0_1583.1_58579.t1 | 1 | 1 | C2 | 365 | 441 | 2.3e-16 | 59.3 | 1.8e-19 | 5.5e-16 | 58.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1583.1_58579.t1 | gi|326914603|ref|XP_003203614.1| | PREDICTED: calpain-5 [Meleagris gallopavo] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1583.1_58579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1583.1_58579.t1 atgggatggttcagttccattaagccatacaagggccaagactatgacaaactgaagaaagaggccaaaacaaagggaca tctcttcattgatacagagtttccaccagatgacagactgtttggctgctacgaggcattggacggaggcgagctggtgg aggcccttgaggactttactggaggtgtcggtgaggtcattgacatggtgaaggaaaactactcaaacgacgcagagctc aaagcagcattgttcactcgtatgcagaaagaagtagacaggaaaactctgatggcagcatctataccagctgagtcaag tgaggagatggaagcaaaaacagactcaggtctggttaagggacacgcctatggtatcacagcagtcaaaaatgtgcccc tggaggggtcgggattattcagcttctttaacagggagaagattcatatgatccgactgaggaatccctggggtgaggga gaatggaaaggagccttcagtgatggactgtttggctgctacgaggcattggacggaggtgagctggtggaggcccttga ggactttactggaggtgttggtgaggtcattgacatggtgaaggaaaactactcaaacgacgcagagctcaaagcagcat tgttcactcgtatgcagaaagaagtagacaggaaaactctgatggcagcatctataccatttatgttagacatcacagat tctgaagatgaacccttatttcacctgatgcagaaaacaacacgagcgactggcacaggcgagacaaacaacaccatagg atttactatatttaaggtagaggacaataggaggtatcgagtccatgatatcacgagacaggagaaggttgtatccagtg tgttcagaaatagccgatctatcttcttaaagacccaattaaagaagggtcgatatgttgtcatagtttgtacgtttgat ccaaacattgaagaaaattatctattcagagcatactccagtgactcaaacaactttaaagaactaacgcttgacaagcc tagtagaagtttattatgctgttgctgtattggagcccctaagatggtcacacaagtcaaagtactaaaggccgagggac tggcaaggcaagatgtctcaggagctgacccttactgtgttatttcgtgtgagggggagaaagtacggacaaggacagta gaggacaccacaaaccctgaatggaacgatacagctcttttctttaggaggaaacctttaaagaagcctatcaaaataca gatttggaatcataacatactgaaggatcagtaccttggtaggcatgtgtttgttagtgctgatgaatgtaaagacaaga ttatggcagtcgatctagtgggcaaagggcgaaacatggagaaaatgcccggtaaactctacgtccaaatcacccagagt aaaaattttaattccatctag |
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Protein
| Protein ID | pfu_aug1.0_1583.1_58579.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1583.1_58579.t1 MGWFSSIKPYKGQDYDKLKKEAKTKGHLFIDTEFPPDDRLFGCYEALDGGELVEALEDFTGGVGEVIDMVKENYSNDAEL KAALFTRMQKEVDRKTLMAASIPAESSEEMEAKTDSGLVKGHAYGITAVKNVPLEGSGLFSFFNREKIHMIRLRNPWGEG EWKGAFSDGLFGCYEALDGGELVEALEDFTGGVGEVIDMVKENYSNDAELKAALFTRMQKEVDRKTLMAASIPFMLDITD SEDEPLFHLMQKTTRATGTGETNNTIGFTIFKVEDNRRYRVHDITRQEKVVSSVFRNSRSIFLKTQLKKGRYVVIVCTFD PNIEENYLFRAYSSDSNNFKELTLDKPSRSLLCCCCIGAPKMVTQVKVLKAEGLARQDVSGADPYCVISCEGEKVRTRTV EDTTNPEWNDTALFFRRKPLKKPIKIQIWNHNILKDQYLGRHVFVSADECKDKIMAVDLVGKGRNMEKMPGKLYVQITQS KNFNSI |
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