Gene
| Gene Model ID | pfu_aug1.0_1583.1_58580 |
|---|---|
| Locus | scaffold1583.1 : 15430 ... 28495 : - |
| To GenomeBrowser | scaffold1583.1:15430..28495 |
| Genes list of scaffold | scaffold1583.1 |
| Synonym | pfu_aug2.0_297.1_23825 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1583.1_58580.t1 | 1 | 1 | Ribosomal_L35Ae | 21 | 121 | 8.40779e-45 | 150.4 | 0.0 | 9.80909e-45 | 150.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1583.1_58580.t1 | gi|237862660|gb|ACR24955.1| | ribosomal protein L35a [Lepidochitona cinerea] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 3 |
| maleGonad | 1 |
| mantle | 1 |
| mantleEdge | 1 |
| mantlePallium | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1583.1_58580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1583.1_58580.t1 atggcagaatcttcccaagctactcagtcctcgggaaatccccccaagaaatcaggaagattgtactgtaaagctgtttt cactgggtacaaaagaggactgagaaatcaacatgagaacacagctttattgaaaattgaaggtgtgactgacaaggact cgacagacttttaccttggcaaacgttgtgcatacgtttacaaggccaaaaggaagacagcttgtcctggacatgataag ccaagtcgtatacgtgtaatctgggggaaaatcacaaggccacatggtaacagtggacaggtccgtgctaagttcaggaa gaatctgccttccactgctatgggcaaaagaatcagagttatgatgtacccatccagaatctaa |
|
Protein
| Protein ID | pfu_aug1.0_1583.1_58580.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1583.1_58580.t1 MAESSQATQSSGNPPKKSGRLYCKAVFTGYKRGLRNQHENTALLKIEGVTDKDSTDFYLGKRCAYVYKAKRKTACPGHDK PSRIRVIWGKITRPHGNSGQVRAKFRKNLPSTAMGKRIRVMMYPSRI |
|