Gene
| Gene Model ID | pfu_aug1.0_15835.1_39748 |
|---|---|
| Locus | scaffold15835.1 : 9376 ... 14242 : + |
| To GenomeBrowser | scaffold15835.1:9376..14242 |
| Genes list of scaffold | scaffold15835.1 |
| Synonym | pfu_aug2.0_604.1_14373 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15835.1_39748.t1 | 1 | 1 | bZIP_Maf | 205 | 294 | 7.4e-29 | 99.8 | 6.4e-32 | 1.2e-28 | 99.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15835.1_39748.t1 | gi|113206132|ref|NP_001038136.1| | transcription factor Maf [Gallus gallus] | 2.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_15835.1_39748.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15835.1_39748.t1 atggagccagaccaacacttggcgaatgactatatcaatgaatttgacttagaacagtttcttgaccatccagaaataaa ggaagaatcagatggaaaatttaccgagtgttgtataggaaaaatgaaggcccaagggaacgcgggcggtcgaccagggg gtaaggcgacaccgacgggccactctgtgccggcttcgcctagttcgtcagaaagtgtacccccttcccccgcggaaaac gcccaatttatggaggatctcagctggctaactcaaagtgtggcttttgatcaatcggacccaaatctggctaatgacgt cgacgttttgatttcatcgagcccagaattcgtaaataatttcagcaggtacctagtatcaggggcggaggcggggaaag actccctccctctaacaccgcctatacacgtacaggattcgccccctaaattcaaacggtcattaagcaatattagcaat ataagtgacgtttccatgacaacagagtgtacaaccccggaagaaaatccagcttcacctagctctctgaaagctcctaa gagcccccgggcgagccgagcgctgagctctccgacggctgatgtaccgctagaggatgaggaattggtaacacttccgg tgcgggagcttaatcgccgtttgcagggtttgaacaaagatgacattcagaaacttaaacagaaaagaaggactttaaaa aatcgcggatatgcgcaaaattgccgatctaaacgcatgcagcagagaagtgttctcgaaaaaacgaatcgaactctaga gcagcaggtccatcaccttcaaaggcagcttagcatgctaacacgtgagcgcgagttttacaaagagcaatgtgacattc tcagggcaaaatgcagcatggtagcccaggcccgccgtcgtgagggctcccttaccgacggatctctctccagctatcca agctcaccggactgtgaataa |
|
Protein
| Protein ID | pfu_aug1.0_15835.1_39748.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15835.1_39748.t1 MEPDQHLANDYINEFDLEQFLDHPEIKEESDGKFTECCIGKMKAQGNAGGRPGGKATPTGHSVPASPSSSESVPPSPAEN AQFMEDLSWLTQSVAFDQSDPNLANDVDVLISSSPEFVNNFSRYLVSGAEAGKDSLPLTPPIHVQDSPPKFKRSLSNISN ISDVSMTTECTTPEENPASPSSLKAPKSPRASRALSSPTADVPLEDEELVTLPVRELNRRLQGLNKDDIQKLKQKRRTLK NRGYAQNCRSKRMQQRSVLEKTNRTLEQQVHHLQRQLSMLTREREFYKEQCDILRAKCSMVAQARRREGSLTDGSLSSYP SSPDCE |
|