Gene
| Gene Model ID | pfu_aug1.0_15863.1_10863 |
|---|---|
| Locus | scaffold15863.1 : 1 ... 12145 : - |
| To GenomeBrowser | scaffold15863.1:1..12145 |
| Genes list of scaffold | scaffold15863.1 |
| Synonym | pfu_aug2.0_1166.1_21448 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15863.1_10863.t1 | 1 | 1 | zf-C4 | 304 | 326 | 8.1e-10 | 38.8 | 3.1e-13 | 2.3e-09 | 37.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15863.1_10863.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15863.1_10863.t1 atggttcttgcgacgtcggacgaagagaactgcgtcgtcccaatgacggcacaacccgacgacggcgtaaataataacaa taataacaacgtcggttcacagctgttgaaggcggcattactgaaacccttacatgaattacaaaaccaaatgtcggaca atttacttaagggaaatgacaaatgtacagaacagtgtcacctaaaatctgaaacacagaatgatctcgtgatggttgaa ccacagaatgccccttcacatgtacccgtttccgttcctacaggccccatgaaggaaaactcaaccgaatgtaacgcaca aaaatcatctgttaacgaaaatgtagggaaaagagtttaccaggataagccagaagaagcagacgttacaaacggacaaa aatttcaatcacacgatcaatcaacagtcgttcacgaggacatggaggtagcaacgaataactcacgtgatcaagatgtt gatgacgtcattcttgtcagtttccaacccccgacaactgtaacaaattcagacacctatattccgttacagagtagaaa tgctcatgcattcaaccttaatcctgtttactcgactgaaaatcagctacacaaacaatcgagccctctttcaagtgcat tcgacggtcacgtatgttcaaatggtatacgaagtggcagtgagtcgggtagctctctgaatagtagtgacgtcaacagt ccgtcatcgctcaacaacgaatctccacaaagttataacaatggatctccatttaacggaagtgatgtcatgccgtctgc acctccgatgatgtcatatccggtcgatgtcagcagcacaagcagaccaccaaaaccaaaaagacggattaagccgcaag accggatttgcacagctgatggccatattctgtgtagagtgtgtggagataaagcatccggcttccactatggtgtgttc tcttgtgagggctgcaaattagtggaggtgatagtagatatacgagctatatctaccacattccttgaggacattatgat ggcacaagtggaagtcagtgactga |
|
Protein
| Protein ID | pfu_aug1.0_15863.1_10863.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15863.1_10863.t1 MVLATSDEENCVVPMTAQPDDGVNNNNNNNVGSQLLKAALLKPLHELQNQMSDNLLKGNDKCTEQCHLKSETQNDLVMVE PQNAPSHVPVSVPTGPMKENSTECNAQKSSVNENVGKRVYQDKPEEADVTNGQKFQSHDQSTVVHEDMEVATNNSRDQDV DDVILVSFQPPTTVTNSDTYIPLQSRNAHAFNLNPVYSTENQLHKQSSPLSSAFDGHVCSNGIRSGSESGSSLNSSDVNS PSSLNNESPQSYNNGSPFNGSDVMPSAPPMMSYPVDVSSTSRPPKPKRRIKPQDRICTADGHILCRVCGDKASGFHYGVF SCEGCKLVEVIVDIRAISTTFLEDIMMAQVEVSD |
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