Gene
| Gene Model ID | pfu_aug1.0_15907.1_32605 |
|---|---|
| Locus | scaffold15907.1 : 5906 ... 12514 : + |
| To GenomeBrowser | scaffold15907.1:5906..12514 |
| Genes list of scaffold | scaffold15907.1 |
| Synonym | pfu_aug2.0_887.1_24493 |
Manual annotation
| Study field | Environmental Response |
|---|---|
| Gene name | class A rhodopsin-like G-protein coupled receptor |
| Description | Similar to EFX82580.1| putative neuropeptide receptor [Daphnia pulex; NP_001106940.1| sex peptide receptor [Tribolium castaneumclass |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15907.1_32605.t1 | 2 | 1 | 7tm_1 | 29 | 55 | 1.7e-22 | 79.7 | 0.11 | 550.0 | -0.6 |
| pfu_aug1.0_15907.1_32605.t1 | 1 | 1 | 7TM_GPCR_Srw | 47 | 342 | 1.1e-20 | 74.0 | 7.8e-24 | 3.9e-20 | 72.2 |
| pfu_aug1.0_15907.1_32605.t1 | 1 | 1 | 7TM_GPCR_Srsx | 50 | 339 | 1.1e-11 | 44.3 | 3.1e-15 | 1.5e-11 | 43.9 |
| pfu_aug1.0_15907.1_32605.t1 | 2 | 2 | 7tm_1 | 56 | 322 | 1.7e-22 | 79.7 | 3.5e-26 | 1.7e-22 | 79.7 |
Transcript
| Transcript ID | pfu_aug1.0_15907.1_32605.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15907.1_32605.t1 atgtcgtctggaaacagttcttcggacccctcgaccggaaactggatggagcataacatgtcatcatttgactatgtgtc tttgtgtgcgccattccagtatttaaattcctttacagtttatggattactttttccaatcgtttccatggtgacggtaa taacgaactgtctgattatttccgtgtttgtcgaacgacgcatgcgctctccaactaccgttctcttgaccgggcttgca gcctctgacgccattgctgccgccatcagtgtgccactgtatatttatctgtatggtttgggatttgaagatcgtaactt gagctatcctatgtgtatctaccatgagtattcctatattatatccaatatattccacacggcctccgcatggcttacga caacactaggtgtacagagatatgtcgtggtggcgtatccatttagaggacccaggctttgcaccatgcagaaatcctac acccttgtttgtatagttttccttgcggctcctctgatttatataccaacctttctataccgtgatttccaagaagtgaa agtagacgtcaacgggacttttgtaagcacgtgttactgtccactttccggggttgaagtttacgacaaaattttagttt tcctaaaaagtttcttagtcaaaattatcccctgcacgaccttgatcttggtgacatttgccctgattcgaaggctggag atcgaaacagaccggatgctgcgcctgcaagctgaatcagaaggtgagagacgagacttccggcacatccggcggacgtc cattatggtagcgctgatcgtaatcacgtttctattggtcgagattcctagcacggtcaaggtcattatcacgaaccttg acagtacagctatagacaaggagagcgactacaccatgtcgatgtacatgaacttttctctgttggtcagctaccatata aacttctggatctacgtcagtctcagcgagcactttagaacatgtctgagaagtctgtgctcgtttaggaagaagtcgcc gaaccatgatcaccag |
|
Protein
| Protein ID | pfu_aug1.0_15907.1_32605.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15907.1_32605.t1 MSSGNSSSDPSTGNWMEHNMSSFDYVSLCAPFQYLNSFTVYGLLFPIVSMVTVITNCLIISVFVERRMRSPTTVLLTGLA ASDAIAAAISVPLYIYLYGLGFEDRNLSYPMCIYHEYSYIISNIFHTASAWLTTTLGVQRYVVVAYPFRGPRLCTMQKSY TLVCIVFLAAPLIYIPTFLYRDFQEVKVDVNGTFVSTCYCPLSGVEVYDKILVFLKSFLVKIIPCTTLILVTFALIRRLE IETDRMLRLQAESEGERRDFRHIRRTSIMVALIVITFLLVEIPSTVKVIITNLDSTAIDKESDYTMSMYMNFSLLVSYHI NFWIYVSLSEHFRTCLRSLCSFRKKSPNHDHQ |
|