Gene
| Gene Model ID | pfu_aug1.0_15919.1_03657 |
|---|---|
| Locus | scaffold15919.1 : 31161 ... 35015 : - |
| To GenomeBrowser | scaffold15919.1:31161..35015 |
| Genes list of scaffold | scaffold15919.1 |
| Synonym | pfu_aug2.0_348.1_27261 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15919.1_03657.t1 | 1 | 1 | JmjN | 17 | 50 | 4.4e-17 | 61.2 | 4.0e-21 | 5.9e-17 | 60.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15919.1_03657.t1 | gi|181330478|ref|NP_001116706.1| | lysine-specific demethylase 5C [Danio rerio] | 5.0e-15 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_15919.1_03657.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15919.1_03657.t1 atggccatggatgacgtgtaccataatttcattcctcctcctgaggcaccggttttcactccgactgaggaggagttctc ggacccactgggctacattgcaaagatcaagcctattgccgaaaagactggaatttgcaaaatcaaaccaccttcggtgc gtttactatcgatagatttcactttcttacaattacaactgtgctcgtttatatactaa |
|
Protein
| Protein ID | pfu_aug1.0_15919.1_03657.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15919.1_03657.t1 MAMDDVYHNFIPPPEAPVFTPTEEEFSDPLGYIAKIKPIAEKTGICKIKPPSVRLLSIDFTFLQLQLCSFIY |
|