Gene
| Gene Model ID | pfu_aug1.0_15924.1_54243 |
|---|---|
| Locus | scaffold15924.1 : 16833 ... 46203 : - |
| To GenomeBrowser | scaffold15924.1:16833..46203 |
| Genes list of scaffold | scaffold15924.1 |
| Synonym | pfu_aug2.0_95.1_16907 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15924.1_54243.t1 | 1 | 1 | Fer2_2 | 56 | 112 | 4.1e-23 | 81.0 | 2.1e-26 | 7.9e-23 | 80.1 |
| pfu_aug1.0_15924.1_54243.t1 | 1 | 1 | Ald_Xan_dh_C | 175 | 282 | 9.5e-38 | 128.6 | 3.89995e-41 | 1.5e-37 | 128.0 |
| pfu_aug1.0_15924.1_54243.t1 | 2 | 1 | Ald_Xan_dh_C2 | 286 | 330 | 6.7e-16 | 57.6 | 1.9e-13 | 7.0e-10 | 37.8 |
| pfu_aug1.0_15924.1_54243.t1 | 2 | 2 | Ald_Xan_dh_C2 | 330 | 366 | 6.7e-16 | 57.6 | 8.1e-09 | 3.0e-05 | 22.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15924.1_54243.t1 | gi|260790475|ref|XP_002590267.1| | hypothetical protein BRAFLDRAFT_216227 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_15924.1_54243.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15924.1_54243.t1 atgcagacccagagactactttactgttctatctcagaaacaattgtatatgttggatatactgttggaaacatacgtta taccgtcagggacaagccccgacggtataactgcgtttccaacagtatatccaacatatacctgtttgaaccacaaaaca cagagcgtatagccaagtcgcatggttcacagtgtgggttctgtactccaggcatcgtcatgtccatgtatacactactc aggaataacccaaaaccgacaagatcagacatggagagtgcgtttgaaggtaatttgtgtagatgtactggatacagacc tatactggatggcttcaaaacatttacaaagtatcctagcatggtgaagtccaaggttccctccttctacaaaagtgcca cgcccacattccatcgtgagcccagtaagagtacccaagtgtatgaggaggtggcccccagtcagcctgacctcgacccg ctgggcagacccatcagccatctgtcaagttctaaacaagcctcgggagaagctatatatgtcgacgacatgcccaggtt tgaaaatgagttacacttggccttggtgaccagtagtaaagcccatgccaagattgtcaatattgatgcatcagaagccc tgaagatgccgggagttgtggattttgtatgtcataaggacgtaccgggagaaaatcactggggatcggtaatgcctgac gaggaaatgtttgcttccaaagaggtgacatgtcagggtcaggttataggagctgttatagctgacacccaggttcacgc ccagagagcggccaagtgtgtcaacatacagtatgaaccattggagcaaatcattaccattcaggttgctagcaggactt taaaggttcctgcctcaaagatccacataagtgaaacaagtacaaacacagtaccaaatacatcagccacagctgctagc tgtagctctgatctcaatggtatggcagttatgggctatggcctgatgatgctagagttacagaaagtgtcccctgatgg atttttattcacacgaggtcctggtaattacaagatacctgggtttggggatatacctgtcgagtttaacgtctctctac tcaaaggcagtgtcaacaagagagcagtgtattcatctaagataaagaacaaattttggtgtgataatgtctgcgataag gaatttaattttgacatactgtatgcaactttgaatttgctcagtcttactgttgccagtttagatagatatgcacatga aattttgatttga |
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Protein
| Protein ID | pfu_aug1.0_15924.1_54243.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15924.1_54243.t1 MQTQRLLYCSISETIVYVGYTVGNIRYTVRDKPRRYNCVSNSISNIYLFEPQNTERIAKSHGSQCGFCTPGIVMSMYTLL RNNPKPTRSDMESAFEGNLCRCTGYRPILDGFKTFTKYPSMVKSKVPSFYKSATPTFHREPSKSTQVYEEVAPSQPDLDP LGRPISHLSSSKQASGEAIYVDDMPRFENELHLALVTSSKAHAKIVNIDASEALKMPGVVDFVCHKDVPGENHWGSVMPD EEMFASKEVTCQGQVIGAVIADTQVHAQRAAKCVNIQYEPLEQIITIQVASRTLKVPASKIHISETSTNTVPNTSATAAS CSSDLNGMAVMGYGLMMLELQKVSPDGFLFTRGPGNYKIPGFGDIPVEFNVSLLKGSVNKRAVYSSKIKNKFWCDNVCDK EFNFDILYATLNLLSLTVASLDRYAHEILI |
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