Gene
| Gene Model ID | pfu_aug1.0_15927.1_18284 |
|---|---|
| Locus | scaffold15927.1 : 10063 ... 32765 : - |
| To GenomeBrowser | scaffold15927.1:10063..32765 |
| Genes list of scaffold | scaffold15927.1 |
| Synonym | pfu_aug2.0_8325.1_19626 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15927.1_18284.t1 | 4 | 1 | DUF2428 | 208 | 289 | 9.3e-38 | 129.7 | 2.8e-27 | 1.4e-23 | 83.2 |
| pfu_aug1.0_15927.1_18284.t1 | 4 | 2 | DUF2428 | 289 | 330 | 9.3e-38 | 129.7 | 1.9e-15 | 9.2e-12 | 44.5 |
| pfu_aug1.0_15927.1_18284.t1 | 4 | 3 | DUF2428 | 616 | 641 | 9.3e-38 | 129.7 | 0.19 | 940.0 | -1.4 |
| pfu_aug1.0_15927.1_18284.t1 | 4 | 4 | DUF2428 | 774 | 805 | 9.3e-38 | 129.7 | 0.85 | 4200.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15927.1_18284.t1 | gi|10437960|dbj|BAB15133.1| | unnamed protein product [Homo sapiens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15927.1_18284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15927.1_18284.t1 atgcagaaacaagaaccgtcatctgactcccccgaatgtttgtttggagttgtcagtgtcactgtggtgcatcaggctct cagcagtgctgatgatcaggtgagattggatgcatttgctcttctatgtgacaaccataaaacttctgaaccaatcagct tgctggaattcaaattaattcagcacttcctgttatggaatctgaataaccaatctccttccttcagacaacatttactg tcacatgtcaaaaagctttttcagaggttcaaggaaagtgaaattgcagcattacgtaaaatgaaggttaaagataaaca gcaggagtcatccactggtacactacagtactatcaggacttccagacctggctgtttaacctcctccttcactgcctct atcctggagcctcctttgccaggaggagtacaagtctgtccattctgttgctgatgatagacaccttctctcatgatcat gatactggttttacattgaagacatattgggaaggaaaacatatacagacattaatggaatgtctaacagatacatttga ggataacaaaatggaagcatttaaaattctcaagtcctgcttcaacgtgggcctagacttacaggttaaaaccataggag attacttcaccagacagctgttggactctatacatcgtggagcgtttgagttggcatgtgccggctttgtaaagcagtgt gatatgttatggaaaagtaatatcaaagagctaaatcaactgccaggacagtggttagagtcagtaatgatggaagtgaa gggtgatgataccaacaatagactgtgtgccactcgtcgtagtgcaggattaccattctttatacaggtacatgcgttga atattttgagagcattgtatcgggacacaaggttaggggaggtggtaacaccttacatatcatctggtctacaggctgct gtcctcggtttccagtcaccattttgggcagttagaaattcagcaacattacttctcagtgcaatgataaccaggatatt tggagtgaaaaggagcaaggacgaatctaacctttcaaagaaaaactgatgtagctatagtcctgtatttaagacacgtc agatggcatcgagggcgttacgacctctagtacagagagataagatgaagactgttctccaacagttactgtccttgatc ccagatgacatggataaagaagttatacatgtatgtaccagtcgtgtacatggtgcgttgttacaggtcaatggactttt ggaaatgataaaggctcaggctggggaggaatggtatgatacatgtatagtcgtggtcgagtcatggagtaaaaaactat ggtatcttgagagttgtaacaggtgctactatacaaggatggaggcatatacattttccttcagaataatagagatacta agctgcaaaagtctccacaagaattgtgttgtgtacaactctctcttttctaaagtcaaggacacactcatatctgccta taacagtggtgaattttcaaatacaaagctactgaacctccctggttacattgagtttgctactaccatatctgacatgt ttcttactcgtatagtatttggctgtaataaatataagactgaggagaaagtaggaataatttgtaatttgttggattct gaagtctatgatgtaagactagctgtccttgataatctaactcagagaattctaattgtggatgtgccacaggaagatat acctgaggtcttgacatctagagagattttagagaaactacttcacatggcacttggtaaagaggaccattttgaatgcc acataaagtcacaagagccgagtaatttactcgagagatggatggacgtcttactgtgtagtataggatcagaacagagt gtagagttacaatgtagtgtggccgaagtcatccagtgcaatgctgacttactattgaaatcacacgactacctaggtcc tttgacctttacattctgggacatattggtacaactacagcaaagtgatgatcaaaaggtcaaggacattgtaaccaagg tcattttagaacttcaaccagacataacagcccctcttcatcccaccctgactttagacaggactgtgaaggtcatgata gaactgcatggtaaaagcagaggaaaacattgcctagagacattaatcaactggattatgagagttgatattactgacaa ggaaggagaagaaaggctgtttgacaagagtgaaatgaacacattcaaagaggacttggtgtttactgagatagtagtaa aacatatactcaattctatgacaacgttgaaacagcacagtgaaagctccatcccattggacatggtcagggaaaatgga acggcatttacagagatgagagaaagccaaatacagatcaatattgaggagaatgagctaaatgaattgtgtgaaaagtt caatgaaaaactctcagaagagagttttaactgggagaatatctcagaattgactccatttgttaaaagtgggttgtatc aggaacaagctggacttgtttacaagtacttcgtgacagacttgctcatcaattctttcttcaaagatgcaaatagagtt aaacatgtgaacacaaaattacaacacttcaaggatatggtgccaaacacatttttctggcctattcttgcaggcttaag atag |
|
Protein
| Protein ID | pfu_aug1.0_15927.1_18284.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15927.1_18284.t1 MQKQEPSSDSPECLFGVVSVTVVHQALSSADDQVRLDAFALLCDNHKTSEPISLLEFKLIQHFLLWNLNNQSPSFRQHLL SHVKKLFQRFKESEIAALRKMKVKDKQQESSTGTLQYYQDFQTWLFNLLLHCLYPGASFARRSTSLSILLLMIDTFSHDH DTGFTLKTYWEGKHIQTLMECLTDTFEDNKMEAFKILKSCFNVGLDLQVKTIGDYFTRQLLDSIHRGAFELACAGFVKQC DMLWKSNIKELNQLPGQWLESVMMEVKGDDTNNRLCATRRSAGLPFFIQVHALNILRALYRDTRLGEVVTPYISSGLQAA VLGFQSPFWAVRNSATLLLSAMITRIFGVKRSKDESNLSKKNXCSYSPVFKTRQMASRALRPLVQRDKMKTVLQQLLSLI PDDMDKEVIHVCTSRVHGALLQVNGLLEMIKAQAGEEWYDTCIVVVESWSKKLWYLESCNRCYYTRMEAYTFSFRIIEIL SCKSLHKNCVVYNSLFSKVKDTLISAYNSGEFSNTKLLNLPGYIEFATTISDMFLTRIVFGCNKYKTEEKVGIICNLLDS EVYDVRLAVLDNLTQRILIVDVPQEDIPEVLTSREILEKLLHMALGKEDHFECHIKSQEPSNLLERWMDVLLCSIGSEQS VELQCSVAEVIQCNADLLLKSHDYLGPLTFTFWDILVQLQQSDDQKVKDIVTKVILELQPDITAPLHPTLTLDRTVKVMI ELHGKSRGKHCLETLINWIMRVDITDKEGEERLFDKSEMNTFKEDLVFTEIVVKHILNSMTTLKQHSESSIPLDMVRENG TAFTEMRESQIQINIEENELNELCEKFNEKLSEESFNWENISELTPFVKSGLYQEQAGLVYKYFVTDLLINSFFKDANRV KHVNTKLQHFKDMVPNTFFWPILAGLR |
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