Gene
| Gene Model ID | pfu_aug1.0_15978.1_25476 |
|---|---|
| Locus | scaffold15978.1 : 1 ... 12098 : + |
| To GenomeBrowser | scaffold15978.1:1..12098 |
| Genes list of scaffold | scaffold15978.1 |
| Synonym | pfu_aug2.0_184.1_13754 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15978.1_25476.t1 | 2 | 1 | PEPCK | 1 | 109 | 0.0 | 330.8 | 8.54792e-44 | 1.3e-39 | 135.9 |
| pfu_aug1.0_15978.1_25476.t1 | 2 | 2 | PEPCK | 109 | 258 | 0.0 | 330.8 | 0.0 | 0.0 | 194.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15978.1_25476.t1 | gi|148237834|ref|NP_001084302.1| | phosphoenolpyruvate carboxykinase 2 (mitochondrial) [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_15978.1_25476.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15978.1_25476.t1 ttggttggctaaaacagatccagcagatgtggcccgtgtggagagtaaaactttcatttccacagaggaagaacgggata cgataccgattcctaaaagtggagtgaagggaactctgggtaaatggatgtcgccggaggatctggacacagagctaaat atgaggttcccaggatgtatggaaggaaggaccatgtacgtcatcccattcagtatgggtccggtaggatctcctctgtc taagatcggcattcagttaacggactccgcctacgtcgtcgccagcatgcgcgtcatgaccaggatggggtcaaaggtcc tcagaaaggttgttatgcacgacccttttgccatgagaccattcttcggctacaactttggacactatctcaaacactgg ttaagcttccaggagcaatcaaacctgaaacttccgaaaatctatcatgtcaattggtttagaaaagacgatcagggcaa attcatctggcctggattcggtgaaaattcacgagtgttggactggattttccgtcgtgtaaacggtgaagactgtgccg tccaatcagccgtaggtaatattccgactccaaactcgttaaatatggaaggaataaaccaaaatgtagatatggaggcg ctattcgctttacctaaagacttctggcaaagagaagtgaaagaagtatcaaaatactttgacgagcaggttaatgaaga tcttccgccagaaattatgcaagaattgcggaaattagaaacaagggtcaacaccatgttatag |
|
Protein
| Protein ID | pfu_aug1.0_15978.1_25476.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15978.1_25476.t1 WLAKTDPADVARVESKTFISTEEERDTIPIPKSGVKGTLGKWMSPEDLDTELNMRFPGCMEGRTMYVIPFSMGPVGSPLS KIGIQLTDSAYVVASMRVMTRMGSKVLRKVVMHDPFAMRPFFGYNFGHYLKHWLSFQEQSNLKLPKIYHVNWFRKDDQGK FIWPGFGENSRVLDWIFRRVNGEDCAVQSAVGNIPTPNSLNMEGINQNVDMEALFALPKDFWQREVKEVSKYFDEQVNED LPPEIMQELRKLETRVNTML |
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