Gene
| Gene Model ID | pfu_aug1.0_1598.1_15535 |
|---|---|
| Locus | scaffold1598.1 : 3486 ... 28378 : + |
| To GenomeBrowser | scaffold1598.1:3486..28378 |
| Genes list of scaffold | scaffold1598.1 |
| Synonym | pfu_aug2.0_715.1_17758 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1598.1_15535.t1 | 3 | 1 | DUF303 | 74 | 124 | 8.0e-23 | 80.9 | 2.6e-13 | 1.9e-09 | 37.1 |
| pfu_aug1.0_1598.1_15535.t1 | 3 | 2 | DUF303 | 352 | 384 | 8.0e-23 | 80.9 | 0.021 | 150.0 | 1.3 |
| pfu_aug1.0_1598.1_15535.t1 | 3 | 3 | DUF303 | 399 | 490 | 8.0e-23 | 80.9 | 1.7e-13 | 1.3e-09 | 37.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1598.1_15535.t1 | gi|224048439|ref|XP_002195531.1| | 5.99756e-43 |
Transcript
| Transcript ID | pfu_aug1.0_1598.1_15535.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1598.1_15535.t1 atggttttgcaaagaggggccaatacctcaatatggggaacatctcccataacggacgatacaatttacatcagcatcaa tggaagtgaagttggaaatgccactgtcgacgcaaatcatgtatggcaagcagtgttttcacctcctgatggatacggtc ccttcaccataaacgcaacatcgagtcttggtgccgtgaccttggatgatgtatggtttggtgacgtatggatctgctct ggtcagagtaacatgggatttaatgtaaatagattactcaataaaacagatgagtacaaagatgcggtaaattatccaca cgttcgactcttcaatatgcaccataccatagcgaacaccacacttactgaaatcaaagtcaatcttgggcgttgccatc tgaaaatttgtagacgtcttgtcctgtcttgtctgaattacgaatcactcatccgatacaatcgggcatgtaccaatgtt atggatatgcgtagcaaaaatttacataaagccatgaaaggaggggatctccaacaacgctctgttgcagcacccacagc aaaaccccaaaacattcaatacaaaaaggagacaaggacagaaagagaagaaaaagggacaaggtatatgttggaaacat acattatactggcttcgacagagcgagcaactcagtttggattttcaaagtactaccaaaaccacatggttctacaaaag ggtaaacacacagtcatatggggaacatcatccaaagtcggagacaaagttcatatcagcattaacggaagtgatgttgg aaacgccactgttgattctagcagtgtatggcaagtagtgtttactccaccacatgggataggaccctacaccattcaag caacatctagccttggtgccgtgaccttggatgatgtgttgtttggtgacgtatggctcatccggtatgatagagcatgt actgatgttttgganctcttatttcatatatgtcatagaacatcttggtgcaccagtggtttcatcgcactccgcgagac gcttcatcgcaaattgatgaatagtacggaagagtacaacgatgcggctaattatccacatatccgtctgataaagaatc atcatacagctaccaataccactcagaatgatatatctgtaatcgacatcccgtggtcattaccatcggcaagtgagtct gatgctgctggtcatgatagtccacttgtatacagctgtcagtttcccgccatgattatggactggagaaaaaagttcaa tcaagcctcaaaacatacgacgtccgctggatttccatttggatttgtgcagatagcacctagtaaacaaggagacagat attcccgaggttggactgacctccgttggtcacaaactgccagtataggatatgttcccaaccctaaaatgccacacact tttatggctgtagccatggaccttcctgacttccagtcaccttacggatccttcctgcgatcaaatgacgtatcgcatag ctacacgttctggacgtgtaaacggcgctctagaagaaaggatggggttttcaacgacacccggttgcagtaccaacggc aaaatcgcaaaggtcatcctcgttacaaacacgacatagcccgccgtcttgtattatccgccctagctgtcgcataccat gagaaaggatttgacttccagggtccattcccgtcatcttataccttaaactctgcaaagacacaactcagcattgaata tgatcacggaaaaactcccatagaaatcagatcaaatcatggattcgatgtagaagttaagatggacaatttaaaacaag ctacatgcgatgcaatagatgcagcatcgacctatctctatggtataagccaagatatatggtcgaacccggagctgagc tacaatgaacactacgctcatgacgtattgactagagttctggaggaaaaaggattttgcgtggaaaagaagtataagat agacatggcattccgagccaccataggatgtattattaccaatggcggggttaaaccaaacattattcccgaagaatcaa acatggagtttatcatacgtgctccaaccaaagccgaatttgacttgttgacaaagaaatgcctcgagtgttttaaaagt gcagcaaaagcgacaagttgtaaggttgaaataagcattggggaaagaccctacctcaacgtcatttcaaatcgccctct ccaaaaggctttctctagaaactgtgagttaatcggtttagggaatcactcgagcagtagtggctcgccgttaagtggat ccacagatatgggtaacgtttcctatgtggtacccagtatacatccgtgcttctacatcggaagtgacgctgtcaaccac acaagggagttcaccgcggctgcaggtgacccaaaggctcagcattacactctggcacagtctaaagctatggcaatgac ggcaatagacgtattcaccaatcaacagctactacaagacatcaatgaaaggtttaaggaagacatctgttaa |
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Protein
| Protein ID | pfu_aug1.0_1598.1_15535.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1598.1_15535.t1 MVLQRGANTSIWGTSPITDDTIYISINGSEVGNATVDANHVWQAVFSPPDGYGPFTINATSSLGAVTLDDVWFGDVWICS GQSNMGFNVNRLLNKTDEYKDAVNYPHVRLFNMHHTIANTTLTEIKVNLGRCHLKICRRLVLSCLNYESLIRYNRACTNV MDMRSKNLHKAMKGGDLQQRSVAAPTAKPQNIQYKKETRTEREEKGTRYMLETYIILASTERATQFGFSKYYQNHMVLQK GKHTVIWGTSSKVGDKVHISINGSDVGNATVDSSSVWQVVFTPPHGIGPYTIQATSSLGAVTLDDVLFGDVWLIRYDRAC TDVLXLLFHICHRTSWCTSGFIALRETLHRKLMNSTEEYNDAANYPHIRLIKNHHTATNTTQNDISVIDIPWSLPSASES DAAGHDSPLVYSCQFPAMIMDWRKKFNQASKHTTSAGFPFGFVQIAPSKQGDRYSRGWTDLRWSQTASIGYVPNPKMPHT FMAVAMDLPDFQSPYGSFLRSNDVSHSYTFWTCKRRSRRKDGVFNDTRLQYQRQNRKGHPRYKHDIARRLVLSALAVAYH EKGFDFQGPFPSSYTLNSAKTQLSIEYDHGKTPIEIRSNHGFDVEVKMDNLKQATCDAIDAASTYLYGISQDIWSNPELS YNEHYAHDVLTRVLEEKGFCVEKKYKIDMAFRATIGCIITNGGVKPNIIPEESNMEFIIRAPTKAEFDLLTKKCLECFKS AAKATSCKVEISIGERPYLNVISNRPLQKAFSRNCELIGLGNHSSSSGSPLSGSTDMGNVSYVVPSIHPCFYIGSDAVNH TREFTAAAGDPKAQHYTLAQSKAMAMTAIDVFTNQQLLQDINERFKEDIC |
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