Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_15981.1_18293
Locus scaffold15981.1 : 1 ... 8355 : -
To GenomeBrowser scaffold15981.1:1..8355
Genes list of scaffold scaffold15981.1
Synonym pfu_aug2.0_1143.1_11463

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_15981.1_18293.t1 gi|326679171|ref|XP_001346005.4| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_15981.1_18293.t1
Definition-
>pfu_aug1.0_15981.1_18293.t1
atgagggatgatgaaataacaaaaatagtcaaatcagatgaacggattctacagtttggagaaaggatatctgacatcaa
tgttagagtttcacaaaaactacgtgaacttggccgcttggtcctggaaagcaagaagttgtctggtgaagtctgctgta
tcgatgaccttctaaaaacagaaaattgggacactatgataaaatctgtcaagattattgcaggatacaacagtgaaaac
aacaggtatgcagtaccatcttttgccttaaaaattggaagtagcttacataaatgtgctatctacctccaatctcaagg
atgcacagagggagatgaaacgaagaagcaaatagctgaaagttttttaacaaagtatgaaaaggattggaacagtagta
tatctgaacatgcagtgtcttctctagaagcaacaaattttggtaggtctcttctcttacctctggttgaaaatatgctg
aaactaataaactacttaaggaaggaaatggaaagggtttaccaagtggtaaaggaagaatttgagtttggaatgtattt
cacgctagcacaaatgtgcttatcgatgataatcctgttcaacagaaagcgaagtagtttggtagagaaaatgaagttaa
aagacttccaggattctgaaaagctaaatggagaaccagaaccaagaacaagcaaacttagtgaatttgagaggaagcta
tgtaaaacccatacaaggatagaagttatgggaaaaagaggagggaaagaggtagtgctgttcaccaaagaaacggagga
cattcttgaatttcttatttcaaacagagagaaagcaaatgttttaactgactttctttttccaaaacgaagacattcaa
aattcccatatagcggtaacaaattaattagcaagtttgccatagaagcaggagtgcaggatccttctgccttgatctcc
tccaaattcaaaaaacaagtaggaacaataacacagattctgagtatggatgaaaactcacaagacattttcctaatact
acaagaatacggtattgaagttcaccaagaagacaagagactgccagaagaccctttgcatattgcgaaagtggtgaaag
tgctgaacaatatcaataatgttggaaaggagaccaatttccgaggtatcaagtttgaagatgtacagcttggtaaagaa
ggtgagcgatgtagcccccttgggcctcttgtgttatgctttgatcctgtgaccttgacctttgagtaa

Protein
Protein IDpfu_aug1.0_15981.1_18293.t1
Definition-
>pfu_aug1.0_15981.1_18293.t1
MRDDEITKIVKSDERILQFGERISDINVRVSQKLRELGRLVLESKKLSGEVCCIDDLLKTENWDTMIKSVKIIAGYNSEN
NRYAVPSFALKIGSSLHKCAIYLQSQGCTEGDETKKQIAESFLTKYEKDWNSSISEHAVSSLEATNFGRSLLLPLVENML
KLINYLRKEMERVYQVVKEEFEFGMYFTLAQMCLSMIILFNRKRSSLVEKMKLKDFQDSEKLNGEPEPRTSKLSEFERKL
CKTHTRIEVMGKRGGKEVVLFTKETEDILEFLISNREKANVLTDFLFPKRRHSKFPYSGNKLISKFAIEAGVQDPSALIS
SKFKKQVGTITQILSMDENSQDIFLILQEYGIEVHQEDKRLPEDPLHIAKVVKVLNNINNVGKETNFRGIKFEDVQLGKE
GERCSPLGPLVLCFDPVTLTFE

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495