Gene
| Gene Model ID | pfu_aug1.0_16.1_07290 |
|---|---|
| Locus | scaffold16.1 : 241211 ... 255265 : - |
| To GenomeBrowser | scaffold16.1:241211..255265 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug2.0_1491.1_05082 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | fusion protein of P450-like and G-protein coupled receptor fragment-like |
| Description | N-terminal: XP_002406825.1 cytochrome P450, putative [Ixodes scapularis] >gb|EEC01694.1| cytochrome P450, putative [Ixodes scapularis] 95.5 95.5 38% 5e-18 27%C-terminal: GAA37837.1 G-protein coupled receptor fragment [Clonorchis sinensis] 117 117 50% 7e-25 26%p450 9 241 6.4e-36 123.7 2.7e-39 9.3e-36 123.27TM_GPCR_Srw 303 440 7.2e-09 35.0 3.0e-08 0.0001 21.47tm_1 315 582 1.4e-18 66.8 6.0e-22 2.0e-18 66.37TM_GPCR_Srsx 315 603 2.1e-06 27.0 1.5e-09 5.1e-06 25.7 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07290.t1 | 1 | 1 | p450 | 9 | 241 | 7.5e-36 | 123.6 | 2.9e-39 | 1.1e-35 | 123.0 |
| pfu_aug1.0_16.1_07290.t1 | 3 | 1 | 7TM_GPCR_Srw | 303 | 440 | 8.2e-09 | 35.0 | 3.8e-08 | 0.00014 | 21.0 |
| pfu_aug1.0_16.1_07290.t1 | 1 | 1 | 7TM_GPCR_Srsx | 314 | 603 | 6.6e-06 | 25.4 | 4.7e-09 | 1.7e-05 | 24.0 |
| pfu_aug1.0_16.1_07290.t1 | 1 | 1 | 7tm_1 | 315 | 582 | 1.6e-18 | 66.7 | 6.3e-22 | 2.3e-18 | 66.2 |
| pfu_aug1.0_16.1_07290.t1 | 3 | 2 | 7TM_GPCR_Srw | 458 | 488 | 8.2e-09 | 35.0 | 0.49 | 1800.0 | -2.3 |
| pfu_aug1.0_16.1_07290.t1 | 3 | 3 | 7TM_GPCR_Srw | 527 | 607 | 8.2e-09 | 35.0 | 1.5e-06 | 0.0056 | 15.8 |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07290.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07290.t1 atgctccggccgcaggttgtgaccaaatatttacctgtcatcaatcaagtcacgcatgacttggtcacttacattgaatc gaaaggagaaatacaagatatcaataaacttatgctggattttgctttggaaaatgctggaattctagcattcaacaaac ggcttggcctcctagatacagatgacaaatcgagcactcttaaagaagattttggagtattttttcgtctgctcagtgaa cacttctttttgccacccttgtacaaatatttccggacacctttctacaacacctttgaaaaggctgctaacggaattta caatcgttttgacaaagagcttgaagctgtaaaatctgagatggaatcatccgcccttaaaaaagacgaatccataacgg aaatgcagtgcaaatcgaacactcttcacgaatattattctacttcccaccctccggactttgccaaggaattactggca gacgaacgtttgacagaggactacgtgcgtggtgtattgttagacatcttcatcgcaggaggagacaccacatcaagtac attgagtggtcttttgacgaacatttccaaacacccccatgtccaaaatagactcttccaggaagtagatgaacacatct cagatgatggtcatgtgacgcaagaatctctgaagaaaatgtcatatctcaagtcttgtgtcaaggaatctctcagatat gaaaaagagaatattgtctccaagaaatttgaggtgttccagattttcatccgtaggacaattaaaaaggcaggaaaagt gatggtcaataaaacattaaattcaactagatgggaaggtttcggatcctcacatctagacagcttcctagagtatagaa tttcagcaaaaatctggatctacgtctctccagtgatagttttgaccggtacactaacaagtttgcttgcaatatgtgtt ttagcaaggaaatcactgaaacattcttcttccatgtattttctgactgtattagccgtttcggacatatttgtgttaaa cactggactacttcgacactggatattgagcacatttgacgtagatgttcgcagcctttctatagtaggatgcaagatgc atgtgtactttgtttatgtcagcttggatgtagcatcgtggattttagtggctgtgaccattgaccgttgcattgttgtg cgttggcctttcaaaggtcgttcctacgccacgaaaaataatgctatcaaggcaacgttaattataatcgtacttgcttc actctgcaactgccatctcatatggaacgtctccttagtgaataacgtttgtacaggaactggccattttacaagaaata tttggccgtggatagatcttatgaaaaactctctcataccgtttcttctgatattaatcaccaattcaatgatcatacat cagattgttcgtgcaaacagaagagtcatggcacagcagacaagagagcctcgggttcgctttatttccggaggaagtga cgtcacagacaacggccacgtgttaagacaggatgcgaaacgaccacgtgtgccaagtattaccgccatgcttttgtcaa tcagcctatctttcttcatcttgacatcgccattggtaatctataacattggccgatcatcactgagctcggacacacct ttagaggaacaagttaagtgggatttatttaggacaatagctaatatcctgcagtatacaaataatgccattcacttctt cttatactgtttgtcaggtccaaggtttaggaaagaacttaaagctatgattggatgtaaaaagtctaatgttgttggag agcaatcaacttttgtcatgtga |
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Protein
| Protein ID | pfu_aug1.0_16.1_07290.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07290.t1 MLRPQVVTKYLPVINQVTHDLVTYIESKGEIQDINKLMLDFALENAGILAFNKRLGLLDTDDKSSTLKEDFGVFFRLLSE HFFLPPLYKYFRTPFYNTFEKAANGIYNRFDKELEAVKSEMESSALKKDESITEMQCKSNTLHEYYSTSHPPDFAKELLA DERLTEDYVRGVLLDIFIAGGDTTSSTLSGLLTNISKHPHVQNRLFQEVDEHISDDGHVTQESLKKMSYLKSCVKESLRY EKENIVSKKFEVFQIFIRRTIKKAGKVMVNKTLNSTRWEGFGSSHLDSFLEYRISAKIWIYVSPVIVLTGTLTSLLAICV LARKSLKHSSSMYFLTVLAVSDIFVLNTGLLRHWILSTFDVDVRSLSIVGCKMHVYFVYVSLDVASWILVAVTIDRCIVV RWPFKGRSYATKNNAIKATLIIIVLASLCNCHLIWNVSLVNNVCTGTGHFTRNIWPWIDLMKNSLIPFLLILITNSMIIH QIVRANRRVMAQQTREPRVRFISGGSDVTDNGHVLRQDAKRPRVPSITAMLLSISLSFFILTSPLVIYNIGRSSLSSDTP LEEQVKWDLFRTIANILQYTNNAIHFFLYCLSGPRFRKELKAMIGCKKSNVVGEQSTFVM |
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