Gene
| Gene Model ID | pfu_aug1.0_16.1_07292 |
|---|---|
| Locus | scaffold16.1 : 260726 ... 292316 : + |
| To GenomeBrowser | scaffold16.1:260726..292316 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug2.0_1491.1_05083 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07292.t1 | 2 | 1 | Kinesin | 245 | 281 | 0.0 | 259.7 | 0.41 | 3000.0 | -3.5 |
| pfu_aug1.0_16.1_07292.t1 | 1 | 1 | ZZ | 318 | 350 | 2.0e-06 | 27.2 | 6.7e-10 | 5.0e-06 | 25.9 |
| pfu_aug1.0_16.1_07292.t1 | 2 | 2 | Kinesin | 627 | 940 | 0.0 | 259.7 | 0.0 | 0.0 | 258.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16.1_07292.t1 | gi|329663478|ref|NP_001193034.1| | chromosome-associated kinesin KIF4A [Bos taurus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 2 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07292.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07292.t1 atggacgacatcatagctctgaacgttacttttgaaggcgatggcgagagccctgaaatcttccgcctttattcgcgagt accttggatcgactttgaggccatgttgaaggcacagtatgattgtgatgacatacaagttttctacattgattcggatg gtgactatctggcaaagcagtgctccaatacgcttcatatgaaagttcgaaatattggtccagacgctaatctttttgag cagaacgaggtccctagtcacgttcccattccccttccaaacggacccttcaaacattctgaagagtctgaagttacagc gccccctagtgaacaccaagttgaaataccccctgaggagcctcagatagaaagagtcatagtggtcccaccacaacaag acatcaacagaagtattgaaaacattgttattcaggttgacatggcaacaggagaaagaactgagataaagtgcaccact gggcatgatgttgaaatgactgaaaagaaagaatcctcaagtccaaaagacatacatgtagacgaggagacaggggctta tcacaagggtcagccggcaataaaaaagaagaagcgtgatcgagatttgacgcctgaacgatcagagactcgtagagtga cacagagtgtagatcgggggacaaggtcacgtagacgagcttacgacgcagattcaggagagagtcacgaagaagcacat ctaccctacgctgtatttgttaaatacatggaagagatgaagaaagagctaagatgtgacattgtgaaggacgttgccaa gaagacagtaaaacatgtactgaagggactggacggtgccgtcatacaaggtgtgaaaggtcccgagggtgctgaccctt caatcacaactgtactaccaaaggcagagaaaaaaccggcagatccaaacgtctctcatcctatttactaccacaacaat gtgtactgtgatttttgtgagaaggtcatcgtaggaccacggtacaagtgctgcaactgcgtggactatgacctttgtga acagtgtgaggggatttacggagttcacgaccccaatcatgtctttctgaagcttcgtaagccgatcaaacttcacagaa aaactccgttaatgaagaacatgctgtacaagatgtatcagctcccgtcgacggagtcagaggaaactccagagaaaggt gctcatggagaagagatggaggaatccccagacgccatgatagagaatctggagaacagaaccaaggctaagatggaaag aattcaagccaagctcgctaggaaaagggaacacctaaaggagaaggaaaagaaactgatagaaaaacagaaaaggaaag aagagaaactgaaacagaagttacaacagcagaaagctccacagaaaggaataccagaggggctagctacaaacatgttt gtgtatggtaatctcggagccaagtatttaggggatgtaaatgtggaagacgggacccgtatacagcctggaacgaaatt cctcaaaacttggaagatgcaaaatatcggcaaagtaccctggagggagtcaactaagctgaagaatgtatacggtacca ttccaacgctcaaagacaaagtggacgtacctctccttaaacccggagaacatggatttgtctctgtgactctcatagca ccagatcaaccagggaagtatcagagtcactggaagatggttgattctggagttcaattcggacatcgagtctggtgtga aatcgaagtagaggaaaaacttgtcctcgagccacagcaaaaaactccactacagattgtagagcaagcaaaggctgcag aagaaattgacgacaacaacagtgtgcgagttgccgtgcgatgccgtcccctgagccgtagggaggaggaaaacaaagta gagtcctgcgtagaaatctctgacactcagccgatcgtgactgtgggagacaaatcaatggcatttgattatgttttcca accatcggcaaaacagacagaagttttctttgtgatggttgagccattactggaacaagtattggaaggtcataatgcgg cagttttagcatatggtgagacaggaagtggtagaacgtttaccatgatgggtggtcgagatgtggagggcgttctacct aacaccttacaggctttgttcagcatgatagatagagctacagatgccgaattcacagtgaaaatttcctacatcgagga tttcaaggaccaactctacgacatgatgaagaaacatgacgagagagagccacttagggtcaaagaaagaccagccactg gaatctatatccaagatttgacagaggttgaagtgaaaagttacgatgaagccctacagtatcttcccatcagtgctaac gccacaagttgtatatcttatgcttcttacttcaattactgtaacagggactcttcctttatcttcacagtgcaggtcga gagacgcagcaaaattgaccagaatgaccttcaagtaagcaagcttcacctggtggatatggcaagttcagaaagaagga cgaagactgcagccagcggcgctattctgaaagaagcgtctaaaatcggattatctcgcaacggctttggctcagtgatt tatgctctgacatcaaacgccaagcatgtaccgtacagagaatgcaaactgactcgcatccttaaagaatgccttggcgg taatggccacttgttgatgctggcctgtatcaaccaatcagagagcagtcgtgatgaaacaatgagcaccttacgtttgg cgtcacgcatgaggaaaataaaaaacaagcctgtagtaaacaggatcacaccagtcaaagaagttcatcttacgaccttt catcaaccgattactaccaaaacagattaccggctgattactgtacatgggtatatagcgtatcgtcggggtgtatcgat acttggatcgcgaaaaaaaatatcgcgatgcaccgatgaatcggagtatcgtcccagccctatgggaaagggtaccttca taaaacgttcagcagaggtcaaggacacaaatgttgactcccaggtcaaggacacaagtgttgactccaaggtcaaggcc gtagatgagaaagtggaagtgtttttactggagaaaccactcaacaaagactgtagcaacgaattacaggaaatttcagt cagaaaaatggacaatatcgaaaaatctgaaactccgaaaacagaagaagaaatttcttcaaagatagcagaggaaactc cgtctgaggaagaggaaattccggaagtgatcgatgattgcgtacagatggacaatgattcatcacggctcgagcaggat cttaattgtgccgttgctgcggtggagaaattgaaattggaggaagagcaacaagaagctacagttgcaggacaggacct gatttctttcgatatgctcggaggactcgttgctaggggaccctctatgacatcacacacggcgacgcctaacaacacac cactagtggtctcccctcccaaatctccggcaccggagctggataacgataaagatgaaacgttgtccacaagcagtgta gaaatcatgaacgctgacatgccggaagaagaagaagctgtcctgatcgacgatccttttaccaaagataatctgtgtaa tatacaagtgtcacctctaaatcgtcaagctgatgagctgagatcttggagccctgacattgatgagtttagcacagacg atgagagcctaagcgaggacgatgactttgtcttagtaccaatgcctgattgctttgacacaagtaaaccaatcaaatcg tctgttatattggatgattggtcaggctctgaggatgaggcaccccatggggacgtggaaacggatgaggctccaagggg gaaaaaggaagatttactcagcactcaaagtagcaaaagtagtgaagatgactttcgtcaagtttctgtggatgagatct tgaccgcgtctggatccctctccaccccgccactggatcctgtagtgaatccgcccctggctgagccccagatcaccatc agtgaatccgcccctgccactgttgccatggtaacacctataccagacatacagactgtaccagcggagggagaattctt tgaagctttgtctgaggtaccaagaggggaacaggatatcggagcctcaggaaatgttgacagtccacccctcaacacag aaacaggggagagaagtgctaataacacagaaatcctcgcacagacgtcacctgataacgcaggggagagtactcacgtc aaacatcctctaccctcagataacgcccctgaaaatcctagcgaatccaccactgataatacacaggatctcccgcaagg tgccacagcaggcgacaatcacaatgccagtgagcttgtcaataatgtgataaaggctgccaaccaagtggcatctaacg cttacacgacatgtaaagaagtgttctacacatggcaggcaaggacttatcagaatggaactccaaacaagtacaaaccc ccacaatcaaattggaagcccaaggagggtgcatgtgccccgcccccacagactaaatggaaaccaaaggaggatacgtt tgtacccccaaaatctacatggaaacccccggcagaaacttggacaccacccgtcgaggaatccccaaagaaacaggaaa gtggacccatgggaaagttgatagaaatgggattctgtgatagggctaaaaataaggttctccttgaaaaacacaaatat gatgtggaggaggtgcttggagaactgttaagagacatggacaactattggatggataataggcactga |
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Protein
| Protein ID | pfu_aug1.0_16.1_07292.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07292.t1 MDDIIALNVTFEGDGESPEIFRLYSRVPWIDFEAMLKAQYDCDDIQVFYIDSDGDYLAKQCSNTLHMKVRNIGPDANLFE QNEVPSHVPIPLPNGPFKHSEESEVTAPPSEHQVEIPPEEPQIERVIVVPPQQDINRSIENIVIQVDMATGERTEIKCTT GHDVEMTEKKESSSPKDIHVDEETGAYHKGQPAIKKKKRDRDLTPERSETRRVTQSVDRGTRSRRRAYDADSGESHEEAH LPYAVFVKYMEEMKKELRCDIVKDVAKKTVKHVLKGLDGAVIQGVKGPEGADPSITTVLPKAEKKPADPNVSHPIYYHNN VYCDFCEKVIVGPRYKCCNCVDYDLCEQCEGIYGVHDPNHVFLKLRKPIKLHRKTPLMKNMLYKMYQLPSTESEETPEKG AHGEEMEESPDAMIENLENRTKAKMERIQAKLARKREHLKEKEKKLIEKQKRKEEKLKQKLQQQKAPQKGIPEGLATNMF VYGNLGAKYLGDVNVEDGTRIQPGTKFLKTWKMQNIGKVPWRESTKLKNVYGTIPTLKDKVDVPLLKPGEHGFVSVTLIA PDQPGKYQSHWKMVDSGVQFGHRVWCEIEVEEKLVLEPQQKTPLQIVEQAKAAEEIDDNNSVRVAVRCRPLSRREEENKV ESCVEISDTQPIVTVGDKSMAFDYVFQPSAKQTEVFFVMVEPLLEQVLEGHNAAVLAYGETGSGRTFTMMGGRDVEGVLP NTLQALFSMIDRATDAEFTVKISYIEDFKDQLYDMMKKHDEREPLRVKERPATGIYIQDLTEVEVKSYDEALQYLPISAN ATSCISYASYFNYCNRDSSFIFTVQVERRSKIDQNDLQVSKLHLVDMASSERRTKTAASGAILKEASKIGLSRNGFGSVI YALTSNAKHVPYRECKLTRILKECLGGNGHLLMLACINQSESSRDETMSTLRLASRMRKIKNKPVVNRITPVKEVHLTTF HQPITTKTDYRLITVHGYIAYRRGVSILGSRKKISRCTDESEYRPSPMGKGTFIKRSAEVKDTNVDSQVKDTSVDSKVKA VDEKVEVFLLEKPLNKDCSNELQEISVRKMDNIEKSETPKTEEEISSKIAEETPSEEEEIPEVIDDCVQMDNDSSRLEQD LNCAVAAVEKLKLEEEQQEATVAGQDLISFDMLGGLVARGPSMTSHTATPNNTPLVVSPPKSPAPELDNDKDETLSTSSV EIMNADMPEEEEAVLIDDPFTKDNLCNIQVSPLNRQADELRSWSPDIDEFSTDDESLSEDDDFVLVPMPDCFDTSKPIKS SVILDDWSGSEDEAPHGDVETDEAPRGKKEDLLSTQSSKSSEDDFRQVSVDEILTASGSLSTPPLDPVVNPPLAEPQITI SESAPATVAMVTPIPDIQTVPAEGEFFEALSEVPRGEQDIGASGNVDSPPLNTETGERSANNTEILAQTSPDNAGESTHV KHPLPSDNAPENPSESTTDNTQDLPQGATAGDNHNASELVNNVIKAANQVASNAYTTCKEVFYTWQARTYQNGTPNKYKP PQSNWKPKEGACAPPPQTKWKPKEDTFVPPKSTWKPPAETWTPPVEESPKKQESGPMGKLIEMGFCDRAKNKVLLEKHKY DVEEVLGELLRDMDNYWMDNRH |
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