Gene
| Gene Model ID | pfu_aug1.0_16.1_07293 |
|---|---|
| Locus | scaffold16.1 : 293958 ... 302385 : - |
| To GenomeBrowser | scaffold16.1:293958..302385 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07293.t1 | 1 | 1 | VHP | 354 | 389 | 1.8e-15 | 56.3 | 5.9e-19 | 4.4e-15 | 55.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16.1_07293.t1 | gi|291241853|ref|XP_002740826.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 3 |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07293.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07293.t1 atgacagtggaactagacgaggagagaggtccacagatacgggtagacgagggtaaggagatgccagcgttcctgaattt atttgacggcagaatgatcattcatatcggaaaacgtgaagaagaatcgacaaatactcaaggtcccttcaagtgttatt gtatacgtaatgaatacgatagcgaactttgtcttatagaagtgccaattggtgccgatcaactccggagccactcgtcc atattaattctcaacgttacttcgggtttactctatatttggcatggatgtaaatcgccatctcacaccaaagaacttgc caggacagctgccaaaaatctcaaagaaaaatgtccgttggaagttggcatgaaggaaaaggcatgtatcgagatcaaag aaacagacgaagggtcagaggacaaagatttctggtccgccataggaacgaagaaagaagagaggagtctgtatcataca ttaataaaagatccattaccctatgacaacagtatacgtttattccacatgaccagcgtatcgggcgtgttcgaggtcac ggaggtcatgaacccaacccgagccccagatctcgtcagtcccttccccttcctacaatcagatctctacaaagcctcac aaccagggctatttttagtagacaatcgtcacatcgtttatttatggcacggctggtggccggaggaggacgaacataca gacaacgtacagacgggctcggccaaggccagatttaatatcgatcgtaaatgtgcaatagataccaccatgcaatactg taaagagaaagattctgaccatccccctgtggcttgtgccgtgtatgcgggactagagccgctagaattcaccaaccttt tcccgtactgggaggtcagtgaagctgccaaaaccatcaacctcaaggaaggaaaaatagaaggggagataacaatgcta gaagagattctacagcgagtcacccagactcgatacacgtttgaagaactcactgacgacacattacctgacggtgttga cccactcaaactagagtcatacctagaggaggacgaatttgaagaaattctagacatgccaaaggatgaattttatgcct taccacagtggaagcagaataaactcaaacaacaagttggtctcttctga |
|
Protein
| Protein ID | pfu_aug1.0_16.1_07293.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07293.t1 MTVELDEERGPQIRVDEGKEMPAFLNLFDGRMIIHIGKREEESTNTQGPFKCYCIRNEYDSELCLIEVPIGADQLRSHSS ILILNVTSGLLYIWHGCKSPSHTKELARTAAKNLKEKCPLEVGMKEKACIEIKETDEGSEDKDFWSAIGTKKEERSLYHT LIKDPLPYDNSIRLFHMTSVSGVFEVTEVMNPTRAPDLVSPFPFLQSDLYKASQPGLFLVDNRHIVYLWHGWWPEEDEHT DNVQTGSAKARFNIDRKCAIDTTMQYCKEKDSDHPPVACAVYAGLEPLEFTNLFPYWEVSEAAKTINLKEGKIEGEITML EEILQRVTQTRYTFEELTDDTLPDGVDPLKLESYLEEDEFEEILDMPKDEFYALPQWKQNKLKQQVGLF |
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