Gene
| Gene Model ID | pfu_aug1.0_16.1_07302 |
|---|---|
| Locus | scaffold16.1 : 388110 ... 417005 : - |
| To GenomeBrowser | scaffold16.1:388110..417005 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug2.0_27.1_23265 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07302.t1 | 5 | 1 | Thioredoxin | 68 | 112 | 0.0 | 176.8 | 4.5e-10 | 5.6e-07 | 29.1 |
| pfu_aug1.0_16.1_07302.t1 | 3 | 1 | AhpC-TSA | 84 | 110 | 4.7e-06 | 26.2 | 0.17 | 210.0 | 1.6 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 1 | Thioredoxin_8 | 85 | 110 | 4.5e-12 | 45.9 | 0.033 | 41.0 | 4.3 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 1 | Thioredoxin_2 | 85 | 111 | 1.8e-11 | 44.2 | 0.00099 | 1.2 | 9.3 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 1 | Redoxin | 87 | 109 | 1.8e-06 | 27.5 | 0.3 | 380.0 | 0.5 |
| pfu_aug1.0_16.1_07302.t1 | 5 | 2 | Thioredoxin | 134 | 195 | 0.0 | 176.8 | 0.38 | 460.0 | 0.5 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 2 | Redoxin | 178 | 249 | 1.8e-06 | 27.5 | 0.2 | 250.0 | 1.1 |
| pfu_aug1.0_16.1_07302.t1 | 5 | 3 | Thioredoxin | 244 | 305 | 0.0 | 176.8 | 3.5e-07 | 0.00043 | 19.9 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 2 | Thioredoxin_8 | 263 | 286 | 4.5e-12 | 45.9 | 0.12 | 150.0 | 2.5 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 2 | Thioredoxin_2 | 266 | 287 | 1.8e-11 | 44.2 | 0.17 | 210.0 | 2.1 |
| pfu_aug1.0_16.1_07302.t1 | 5 | 4 | Thioredoxin | 327 | 379 | 0.0 | 176.8 | 1.3e-14 | 1.6e-11 | 43.8 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 3 | Thioredoxin_2 | 331 | 359 | 1.8e-11 | 44.2 | 0.00025 | 0.31 | 11.2 |
| pfu_aug1.0_16.1_07302.t1 | 3 | 2 | AhpC-TSA | 333 | 360 | 4.7e-06 | 26.2 | 0.00028 | 0.35 | 10.5 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 3 | Thioredoxin_8 | 334 | 361 | 4.5e-12 | 45.9 | 9.5e-06 | 0.012 | 15.7 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 3 | Redoxin | 334 | 360 | 1.8e-06 | 27.5 | 0.00025 | 0.31 | 10.5 |
| pfu_aug1.0_16.1_07302.t1 | 5 | 5 | Thioredoxin | 389 | 468 | 0.0 | 176.8 | 1.2e-24 | 1.4e-21 | 76.0 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 4 | Redoxin | 402 | 448 | 1.8e-06 | 27.5 | 0.00065 | 0.81 | 9.2 |
| pfu_aug1.0_16.1_07302.t1 | 3 | 3 | AhpC-TSA | 404 | 450 | 4.7e-06 | 26.2 | 0.00082 | 1.0 | 9.0 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 4 | Thioredoxin_8 | 406 | 450 | 4.5e-12 | 45.9 | 3.0e-06 | 0.0037 | 17.3 |
| pfu_aug1.0_16.1_07302.t1 | 4 | 4 | Thioredoxin_2 | 407 | 479 | 1.8e-11 | 44.2 | 6.7e-06 | 0.0083 | 16.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16.1_07302.t1 | gi|156391968|ref|XP_001635821.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07302.t1 atgaagagggatgacccagaagctcatgataagtttttgaagattaccagagcttatgaagtccttaaagatgaggattt gaggaagaaatatgatgaacatggtgaggaaggactgaaagaggacttcaatggaggaaggcgatatgaaagctggaagt tctaccaggaagaatttggtatctatgacgatgacccagaaataattactttaagcaggtcagattttgagatttctgtt caggggacggatgatgtatggtttatcaacttttactcaccacattgtggacactgtcatgagttggctcctacgaaaga gaagtatcacggggagaggacgacaggccagcttgttaaacacgccctcaaacagatcaaggccaaggtcatagaactgt ggagcgggaactttgagagtcagcttaaaagtaacgataaacttccatggcttgtgtcgtactgtggtgatggtggagat tgcttgtccaaaggtacagggcttaaactggctgcaatgttggcagagcttgtaaacgttgccatcatcgggtgtaacaa caacgagaaactctgtaagaaactaggtcatgattacggcacagtgtattacgatgctggaagcttcaataagaatagcg gagtgaaaattttgggccgagtacaagatggtcagaggaaggcttggctaatacattttgtagacaaagatgacgatcac gacatagaataccgtaaacttccagccatgctgcctactattaacgttgggagagtgaactgtaagaagctgtgggatga atgccagtctctacatatcaacaaattcccgaccttctacgtatttaaaacctctggtggatttgaaatatattatggta gaacgaccgcacatgatgtatcggcttttgccaaggatagcgcaggagtcaaggttacctcccttggtcctgatgatttt aatcatcgtaaagtcggacccaattctccggaaccctggtttgtggacttctttgccccgtggtgtccaccttgcatgag actgttgccagagttccgtaaagctgcaaaggattatgggaacatagtcaactttggtactgtggactgtacgatgcaca ccaatctctgtcgcaatgacaccatgagcccgccagtgattgaccttgacccacatagctttcaggcgttattaatggag cgtgacgatgacacagttttcctggtagactattttgcaccttggtgtggaccgtgtcaacaactcgccccagaatggag aaggctagctaaggagctggacggcaaagtgaaagcaggaaaagttaactgtgatgaggagcagtcactgtgtcaacaag caggaatcatggggtatcccagtgtcagattttatcgaggagtacggaatgatggaatgtcgcaggttgaagaattagag agttacagtcacgagttcgatcatgatgaattatga |
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Protein
| Protein ID | pfu_aug1.0_16.1_07302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07302.t1 MKRDDPEAHDKFLKITRAYEVLKDEDLRKKYDEHGEEGLKEDFNGGRRYESWKFYQEEFGIYDDDPEIITLSRSDFEISV QGTDDVWFINFYSPHCGHCHELAPTKEKYHGERTTGQLVKHALKQIKAKVIELWSGNFESQLKSNDKLPWLVSYCGDGGD CLSKGTGLKLAAMLAELVNVAIIGCNNNEKLCKKLGHDYGTVYYDAGSFNKNSGVKILGRVQDGQRKAWLIHFVDKDDDH DIEYRKLPAMLPTINVGRVNCKKLWDECQSLHINKFPTFYVFKTSGGFEIYYGRTTAHDVSAFAKDSAGVKVTSLGPDDF NHRKVGPNSPEPWFVDFFAPWCPPCMRLLPEFRKAAKDYGNIVNFGTVDCTMHTNLCRNDTMSPPVIDLDPHSFQALLME RDDDTVFLVDYFAPWCGPCQQLAPEWRRLAKELDGKVKAGKVNCDEEQSLCQQAGIMGYPSVRFYRGVRNDGMSQVEELE SYSHEFDHDEL |
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