Gene
| Gene Model ID | pfu_aug1.0_16.1_07307 |
|---|---|
| Locus | scaffold16.1 : 459615 ... 491513 : + |
| To GenomeBrowser | scaffold16.1:459615..491513 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug2.0_27.1_23267 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07307.t1 | 3 | 1 | GSDH | 98 | 398 | 0.0 | 213.6 | 5.0e-34 | 7.4e-30 | 104.1 |
| pfu_aug1.0_16.1_07307.t1 | 3 | 2 | GSDH | 462 | 698 | 0.0 | 213.6 | 1.2e-34 | 1.7e-30 | 106.2 |
| pfu_aug1.0_16.1_07307.t1 | 3 | 3 | GSDH | 774 | 795 | 0.0 | 213.6 | 0.097 | 1400.0 | -2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16.1_07307.t1 | gi|189530759|ref|XP_001337342.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07307.t1 atgtgtaaaagcgactgttacaatttttacaaaaagtgtaaatctgcgataaaatatttagtggggaaggacattaccct ttatttcaagtacactttggggaagaaatcattctgcaagttcctacagccgttggacccagcttactgttatccgaaat tcggaggaccggaagcgatgaaaaaagaggaagaggaagcagctgaaaaagcgaaagaagaactagatacagccgaactt gaaaaacaaagcacctgcgtgtgttttgaacaaataaaaaaggattttcacgttcctgtggaccttacgtcacccaatga cggaagcaaacgaattttcgtgacggacttgagtggacagatatcggtttttgattctaacggaactgttataatgcaca attttttcaaccttgataaagaccttgtattccttccccagggtcctgaattggggtttctaggcgtaacggggttggca tttcatcctaaatttagaaagaatggtagattttttgtgtccttcacgatcaaagatcctgttgaagggtcggacgttct aagaattagtgaatataggctttttattcctcagctcttacaaaccattgactggaaaaaaggaaaagttattatgaata ttccactcaccaaacaaaacaatgtcggtggagagcttctgtttggagacgatggttacctgatgattttcctaggagac aactcggatgacgtagatcctgatcgaatggcgcagaaaaagtggtcgtactacgggaaggtattacgtatagatgtaga tgacagattacaaggtgtaccatatggagtacccgaggacaatccttatgttaacttcggcagcattaaaccgcagatct acgcatctggcttccgttctccctggcgatgtggtgtcgatagaggggaccccgaaacaggttacgggaaaggcagagta atatgtgtagaatccgggtactcgcagtatgacgaagtcaattatatcaagaaaggtgcaaattacggatggagcatgaa agaaggaacatcctgttggagtcctatggaatgtgaacaagaaaatctcgaggatccaatattttcacaaatgttccagt caggaatgtcattagtgggtggggccttttacagaggctgtattcagcagttacatgggaccttcgtgttcggaagatgg ggcgacggaaaaatagaatgtttcccgccaccagtgttcgacgatgatactggaaatgaggagacggaagtaaacgagga agatgtttccggtgcccaggatgcagcaaattgtgcatgcttcgagccagtcaaatgggatttctatgttccggttcaac tcatttcgccaaatgacggttcgggtagaatattcattgcagatttggaaggaaaggtctcaacattcgacgagaacggg gttcccttaataagcactttcttcgagcttgatgataaagtgtatgcacctcaagggccccagcaaggatttttgggtct aacaggaatgacttttcacccaaattttaaagaaaatggaaaattttacatttcttataccacttggataaaggcgattc aaggatttgttataaaaatcagcgaatatgagacaaaagatatgttaatgaaaattgaccaggataaggaaaaagttctt cttcagataacgattgagaaccttaacaatgttggaggggagcttatttttgatgaagatggatatcttttgatatttgt cggtgacaactccccggatgttgatggatatcggaatgcccagaaaaaggacaatttccttggaaaagtgttgcggatag acgttgacaacaaggacttgaatcaaacatacagtatcccggatgacaacccttttgtaaacgtcagtgatgacgtcaaa ccggaaatattcgcctcgggattaagaaatccgtggcggtgtggtgttgatagaggggatccgtactccggttatggtaa gggtaggattatatgtgtagccactggtcattcctcgttcgatgaaatgaatctgataaagaaaggaaaaaattatggat ggagcatcaaggagggatggcagtgttggagtccaacggaatgtgaaaaagagcaatcactatttgatctgcggacattt tcttcatgtatcaattcgaaatatatatattttttatttgaagttgagctgacagatcctgtatttggccatgatcataa gaaaggattctccctgatcggtggcgctttctatagaggatgtatcaaatacttcagcggcacctacatatacggagaat gggggactggttttgcggctggcatgatcacgttttattccaggaagatgtacaagatgtggcagactgttaaccgtaca tacgaagatggcggatgggagaacggcgaactcgaaatttgttcgtactgccctgctcctctgactggaactatacatcc ctacataacagcagtcagggaagatgataaaggggagttgttcgtgcttgcaatagaggatccaggtggtcaaaacaaga caggaaaagcctataaaatagtatcccctcacctacgaaaaaccaaatgtgtccctccaaaaccggcaccgacagaaaca aaaagtaatgatgatgatacttcgtcatctaagaacgatgatactgatcaatcaaacaacaaaggtggaattcaagttat aatgccgtcacttccgctttctggagaagatggcaatttgctagttgtagaacctgtcgttgttgaaatagaaaatacta cccaaaaaggcgtctttctaaaacctataaaaagttcgaaaacagagtcgggtccaaatttggagacagatgttttacaa tctaatgaagatggaggaaatgtattggaatcaagtaatccttcaccagcaacattcaacgatgaatcaaacgatttgaa aaataataaagaacagaatgtcattcagagtgataatgaacaagttccaggatcgattcatgcgcaacaaatttcagacg acaaagaaacatccggacatgcgcacgatagtgtgactaatcacaatcatgcgcaacaaatttcagacgacaaagaaaca tccggacatgcgcaagagagtgtgactgatcacaattatggatcaaagggagatccgagctcatcagaggaaattcagaa tgacataccattcttggattggattggtgggaatgaagtgaaaaaggaagacgaaacaactaatcctgttccttttgaat ccggaaatgtgatgaaggattttctgtttcaatctgcggagtcgatgaatgacggaaatgaagtatcgcaacagaatcag aacgagggaaagaaaccacgagacactaagaactcaagctataagcttgatggaaatcttaacattctttctattttctt gatgcttgtctttctaacgaagtattga |
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Protein
| Protein ID | pfu_aug1.0_16.1_07307.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07307.t1 MCKSDCYNFYKKCKSAIKYLVGKDITLYFKYTLGKKSFCKFLQPLDPAYCYPKFGGPEAMKKEEEEAAEKAKEELDTAEL EKQSTCVCFEQIKKDFHVPVDLTSPNDGSKRIFVTDLSGQISVFDSNGTVIMHNFFNLDKDLVFLPQGPELGFLGVTGLA FHPKFRKNGRFFVSFTIKDPVEGSDVLRISEYRLFIPQLLQTIDWKKGKVIMNIPLTKQNNVGGELLFGDDGYLMIFLGD NSDDVDPDRMAQKKWSYYGKVLRIDVDDRLQGVPYGVPEDNPYVNFGSIKPQIYASGFRSPWRCGVDRGDPETGYGKGRV ICVESGYSQYDEVNYIKKGANYGWSMKEGTSCWSPMECEQENLEDPIFSQMFQSGMSLVGGAFYRGCIQQLHGTFVFGRW GDGKIECFPPPVFDDDTGNEETEVNEEDVSGAQDAANCACFEPVKWDFYVPVQLISPNDGSGRIFIADLEGKVSTFDENG VPLISTFFELDDKVYAPQGPQQGFLGLTGMTFHPNFKENGKFYISYTTWIKAIQGFVIKISEYETKDMLMKIDQDKEKVL LQITIENLNNVGGELIFDEDGYLLIFVGDNSPDVDGYRNAQKKDNFLGKVLRIDVDNKDLNQTYSIPDDNPFVNVSDDVK PEIFASGLRNPWRCGVDRGDPYSGYGKGRIICVATGHSSFDEMNLIKKGKNYGWSIKEGWQCWSPTECEKEQSLFDLRTF SSCINSKYIYFLFEVELTDPVFGHDHKKGFSLIGGAFYRGCIKYFSGTYIYGEWGTGFAAGMITFYSRKMYKMWQTVNRT YEDGGWENGELEICSYCPAPLTGTIHPYITAVREDDKGELFVLAIEDPGGQNKTGKAYKIVSPHLRKTKCVPPKPAPTET KSNDDDTSSSKNDDTDQSNNKGGIQVIMPSLPLSGEDGNLLVVEPVVVEIENTTQKGVFLKPIKSSKTESGPNLETDVLQ SNEDGGNVLESSNPSPATFNDESNDLKNNKEQNVIQSDNEQVPGSIHAQQISDDKETSGHAHDSVTNHNHAQQISDDKET SGHAQESVTDHNYGSKGDPSSSEEIQNDIPFLDWIGGNEVKKEDETTNPVPFESGNVMKDFLFQSAESMNDGNEVSQQNQ NEGKKPRDTKNSSYKLDGNLNILSIFLMLVFLTKY |
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