Gene
| Gene Model ID | pfu_aug1.0_16.1_07310 |
|---|---|
| Locus | scaffold16.1 : 518105 ... 539945 : + |
| To GenomeBrowser | scaffold16.1:518105..539945 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07310.t1 | 6 | 1 | Ldl_recept_b | 12 | 36 | 1.5e-37 | 127.6 | 0.066 | 330.0 | 1.7 |
| pfu_aug1.0_16.1_07310.t1 | 6 | 2 | Ldl_recept_b | 40 | 58 | 1.5e-37 | 127.6 | 0.0005 | 2.5 | 8.5 |
| pfu_aug1.0_16.1_07310.t1 | 5 | 1 | Ldl_recept_a | 88 | 124 | 0.0 | 182.9 | 1.6e-16 | 7.9e-13 | 48.0 |
| pfu_aug1.0_16.1_07310.t1 | 5 | 2 | Ldl_recept_a | 127 | 162 | 0.0 | 182.9 | 2.2e-13 | 1.1e-09 | 38.0 |
| pfu_aug1.0_16.1_07310.t1 | 5 | 3 | Ldl_recept_a | 168 | 203 | 0.0 | 182.9 | 1.4e-15 | 6.7e-12 | 45.0 |
| pfu_aug1.0_16.1_07310.t1 | 5 | 4 | Ldl_recept_a | 207 | 243 | 0.0 | 182.9 | 1.7e-13 | 8.4e-10 | 38.3 |
| pfu_aug1.0_16.1_07310.t1 | 5 | 5 | Ldl_recept_a | 246 | 280 | 0.0 | 182.9 | 2.7e-15 | 1.3e-11 | 44.1 |
| pfu_aug1.0_16.1_07310.t1 | 6 | 3 | Ldl_recept_b | 374 | 413 | 1.5e-37 | 127.6 | 2.3e-06 | 0.012 | 15.9 |
| pfu_aug1.0_16.1_07310.t1 | 6 | 4 | Ldl_recept_b | 417 | 456 | 1.5e-37 | 127.6 | 9.1e-11 | 4.5e-07 | 30.0 |
| pfu_aug1.0_16.1_07310.t1 | 6 | 5 | Ldl_recept_b | 461 | 502 | 1.5e-37 | 127.6 | 1.1e-17 | 5.3e-14 | 52.2 |
| pfu_aug1.0_16.1_07310.t1 | 6 | 6 | Ldl_recept_b | 506 | 534 | 1.5e-37 | 127.6 | 1.6e-05 | 0.077 | 13.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16.1_07310.t1 | gi|322797679|gb|EFZ19688.1| | hypothetical protein SINV_80786, partial [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07310.t1 atgcttgaattgaattttgctgccacgaggatccagcattcagattttgagggtaatgatgtccagtccataaccggtgt gtccatagcccatccatttggtatagctgcatataaaggtcatatctacttttctgattggaaactagaggcgttactaa gagtgaacagatttggagagcaagagactgtgttacgtacagggatagaatttctaagagacatcaccgtctacgacaaa agtttacaaaagaaaccagataaaacatgttctccaaaccagtttctatgtgacaatggtaaatgtatcggaaaactatg gcaatgtgacggagacaatgattgtggtgatatgtcagatgagagggggtgtaaaaacaagacctgcggagttggccatt ttcagtgccagaactctttatgcatagataacagatttaagtgtgacacagataacgactgtggtgacggatcagatgaa ggtgatttctgtggtacccatacttgtggagtaaaccatttccaatgtgacgatcgtcggtgcataccagaatcaaaagt atgtgatggctccgcagactgttttgactcctctgatgagaaggaatgtccgcccttgaactgctccgcgggtaaatgga cgtgtaagagggtacgacaatgtataccggagcgataccattgtgacggagcagcagattgtaaagacgctagtgatgaa gtggattgtcccacgcctacctgttcatacgacagatttcgttgtggtaacggacgatgtatttctaagtcgtggatttg tgacggtgatgatgattgtggggataattcagatgaagatcaaggtttaacttgtcattccaacgagtgtgatccacctg gcaggtgcagtcagaagtgtataaatacgaaaggtctatttaagtgtgaatgtgagaaaggatatgaactggtagaccat catcagtgtgtggcagatagaaatgtatcaaagccctatcttctaatagccagtcagaatgagatactaaaagccgactt agacattcttcacttcaacaatctacgattccccattttccagtctctagcgggacttgatgtgcacgtagccaaggatc atatttacgcatctgattcgtccctgaagaagatattcagagtcaacatggatggctcaaacttaacagaggttttccca gtgggtgttaacgttgttgaagacctcgctgttgattggataggagagaatttatactggaacgattacgttgtggaaac catagaagtatccaaacttgacggcagtatgaaaacaattctgttcagcgaaaatatcacaaatcctcgagggataggaa tagatcccagagaaggggcccgttttattttctggactgattggggacagaacccaagaattgagagagcaggtatggac ggatcaggaagaaaagtcattgtctcagagaagctttactggccgaatggcttagcgctggactatccgaacaaacgttt gtacttcacagatgctcgacttgactacatagaattctgcaactatgacggcacgggaaggcgcgaagtctttgccaatg accatgtaaagtttaccagttttccttacttttatacgttacttaaagaaaaaatcagtttgacataa |
|
Protein
| Protein ID | pfu_aug1.0_16.1_07310.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07310.t1 MLELNFAATRIQHSDFEGNDVQSITGVSIAHPFGIAAYKGHIYFSDWKLEALLRVNRFGEQETVLRTGIEFLRDITVYDK SLQKKPDKTCSPNQFLCDNGKCIGKLWQCDGDNDCGDMSDERGCKNKTCGVGHFQCQNSLCIDNRFKCDTDNDCGDGSDE GDFCGTHTCGVNHFQCDDRRCIPESKVCDGSADCFDSSDEKECPPLNCSAGKWTCKRVRQCIPERYHCDGAADCKDASDE VDCPTPTCSYDRFRCGNGRCISKSWICDGDDDCGDNSDEDQGLTCHSNECDPPGRCSQKCINTKGLFKCECEKGYELVDH HQCVADRNVSKPYLLIASQNEILKADLDILHFNNLRFPIFQSLAGLDVHVAKDHIYASDSSLKKIFRVNMDGSNLTEVFP VGVNVVEDLAVDWIGENLYWNDYVVETIEVSKLDGSMKTILFSENITNPRGIGIDPREGARFIFWTDWGQNPRIERAGMD GSGRKVIVSEKLYWPNGLALDYPNKRLYFTDARLDYIEFCNYDGTGRREVFANDHVKFTSFPYFYTLLKEKISLT |
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