Gene
| Gene Model ID | pfu_aug1.0_16.1_07316 |
|---|---|
| Locus | scaffold16.1 : 660225 ... 671667 : + |
| To GenomeBrowser | scaffold16.1:660225..671667 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug2.0_1509.1_31721 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07316.t1 | 4 | 1 | TPR_2 | 2 | 17 | 2.3e-14 | 52.0 | 0.089 | 78.0 | 3.5 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 1 | TPR_1 | 2 | 10 | 5.7e-13 | 47.8 | 0.6 | 520.0 | 0.5 |
| pfu_aug1.0_16.1_07316.t1 | 2 | 1 | TPR_16 | 2 | 57 | 1.0e-08 | 35.6 | 2.7e-07 | 0.00024 | 21.6 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 1 | TPR_8 | 2 | 16 | 7.5e-08 | 31.6 | 0.48 | 420.0 | 1.1 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 1 | TPR_12 | 2 | 55 | 4.7e-07 | 29.6 | 2.1e-06 | 0.0019 | 18.1 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 1 | TPR_14 | 2 | 19 | 2.3e-06 | 27.7 | 0.3 | 260.0 | 2.7 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 1 | TPR_6 | 2 | 18 | 5.6e-06 | 26.4 | 0.35 | 310.0 | 2.2 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 1 | TPR_11 | 3 | 55 | 1.6e-17 | 62.9 | 1.6e-06 | 0.0014 | 18.2 |
| pfu_aug1.0_16.1_07316.t1 | 2 | 1 | TPR_19 | 3 | 57 | 3.5e-08 | 33.6 | 5.0e-07 | 0.00044 | 20.5 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 2 | TPR_11 | 24 | 60 | 1.6e-17 | 62.9 | 1.7e-06 | 0.0014 | 18.1 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 2 | TPR_2 | 25 | 57 | 2.3e-14 | 52.0 | 2.9e-08 | 2.5e-05 | 23.8 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 2 | TPR_1 | 25 | 57 | 5.7e-13 | 47.8 | 3.1e-08 | 2.7e-05 | 23.5 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 2 | TPR_6 | 25 | 57 | 5.6e-06 | 26.4 | 4.2e-05 | 0.037 | 14.5 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 2 | TPR_8 | 26 | 57 | 7.5e-08 | 31.6 | 0.0001 | 0.091 | 12.5 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 2 | TPR_14 | 28 | 61 | 2.3e-06 | 27.7 | 0.003 | 2.6 | 8.9 |
| pfu_aug1.0_16.1_07316.t1 | 2 | 1 | DnaJ | 39 | 75 | 5.6e-25 | 86.8 | 0.047 | 41.0 | 4.0 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 2 | TPR_12 | 56 | 73 | 4.7e-07 | 29.6 | 0.12 | 100.0 | 2.9 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 3 | TPR_1 | 57 | 68 | 5.7e-13 | 47.8 | 0.65 | 560.0 | 0.4 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 3 | TPR_2 | 58 | 70 | 2.3e-14 | 52.0 | 0.2 | 170.0 | 2.4 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 3 | TPR_8 | 59 | 68 | 7.5e-08 | 31.6 | 0.41 | 360.0 | 1.3 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 3 | TPR_11 | 73 | 133 | 1.6e-17 | 62.9 | 5.3e-14 | 4.6e-11 | 42.2 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 4 | TPR_2 | 76 | 103 | 2.3e-14 | 52.0 | 1.6e-07 | 0.00014 | 21.5 |
| pfu_aug1.0_16.1_07316.t1 | 2 | 2 | TPR_16 | 76 | 103 | 1.0e-08 | 35.6 | 0.00054 | 0.47 | 11.1 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 4 | TPR_1 | 77 | 103 | 5.7e-13 | 47.8 | 2.1e-07 | 0.00018 | 20.9 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 3 | TPR_12 | 79 | 99 | 4.7e-07 | 29.6 | 0.003 | 2.6 | 8.0 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 3 | TPR_6 | 79 | 102 | 5.6e-06 | 26.4 | 0.016 | 14.0 | 6.4 |
| pfu_aug1.0_16.1_07316.t1 | 3 | 3 | TPR_14 | 80 | 103 | 2.3e-06 | 27.7 | 0.00033 | 0.29 | 11.8 |
| pfu_aug1.0_16.1_07316.t1 | 2 | 2 | TPR_19 | 83 | 104 | 3.5e-08 | 33.6 | 0.00075 | 0.65 | 10.3 |
| pfu_aug1.0_16.1_07316.t1 | 4 | 4 | TPR_8 | 83 | 103 | 7.5e-08 | 31.6 | 4.6e-05 | 0.04 | 13.6 |
| pfu_aug1.0_16.1_07316.t1 | 2 | 2 | DnaJ | 143 | 210 | 5.6e-25 | 86.8 | 2.4e-27 | 2.1e-24 | 85.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16.1_07316.t1 | gi|348508693|ref|XP_003441888.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07316.t1 atgctcggaaggtaccaagaagctcaagaaattgctaatgatgtgttacaacgagaagacagtatgaacagtgacgctat atatgtgagaggattgtgtttgtactatcaggacagtatagataaagccttccaacattttcaacaagttttacgtttag ctcctgatcatgtcaaggccaaagaggtttataggaaagccaaagctcttacggcaaagaaggaagagggaaatcaggag ttccgtagcggaaatttaaacaaagcaatagaaatatatacagaagctttgtcaatagatcctaataataaatttacaaa ttctaaattatattttaaccgtgcaacagtatcttcaaaggttcggaacgaaaacaaaaggttgttacaagatgcaaaat tggaattaaagaaaagcaaaaggaaagacttttataaaattctgggcatttcaaaaacggcttcagacgacgagatcaaa aaagcatatcgtaaacgggcattgatgcatcatccagatcgtcacagtcatgacaccccagaaaaacagaaagaagaaga acttaaattcaaggaactcggggaggcgtacagtatattatcagatccacgtaaaaaggacaggtacgatagtggagcag acttggaagacttagagggaggtggattcgatcatgtagatcctaatgtgatattccagtcatttttcggaagcggattc ggaggtggaggtgggggatttcctggtggtggatttccgggcggatttacgttccaatttggatga |
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Protein
| Protein ID | pfu_aug1.0_16.1_07316.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07316.t1 MLGRYQEAQEIANDVLQREDSMNSDAIYVRGLCLYYQDSIDKAFQHFQQVLRLAPDHVKAKEVYRKAKALTAKKEEGNQE FRSGNLNKAIEIYTEALSIDPNNKFTNSKLYFNRATVSSKVRNENKRLLQDAKLELKKSKRKDFYKILGISKTASDDEIK KAYRKRALMHHPDRHSHDTPEKQKEEELKFKELGEAYSILSDPRKKDRYDSGADLEDLEGGGFDHVDPNVIFQSFFGSGF GGGGGGFPGGGFPGGFTFQFG |
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