Gene
| Gene Model ID | pfu_aug1.0_16.1_07317 |
|---|---|
| Locus | scaffold16.1 : 673875 ... 692066 : + |
| To GenomeBrowser | scaffold16.1:673875..692066 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug2.0_1509.1_31722 |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | ADAM17-like |
| Description | BLASTP hit to XP_001647994 adam [Aedes aegypti] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07317.t1 | 1 | 1 | Reprolysin_5 | 214 | 427 | 5.3e-25 | 88.5 | 5.1e-28 | 1.3e-24 | 87.2 |
| pfu_aug1.0_16.1_07317.t1 | 1 | 1 | Reprolysin_4 | 215 | 448 | 3.6e-19 | 69.0 | 2.6e-22 | 6.5e-19 | 68.2 |
| pfu_aug1.0_16.1_07317.t1 | 3 | 1 | Reprolysin | 217 | 339 | 2.0e-09 | 37.3 | 1.3e-05 | 0.032 | 13.8 |
| pfu_aug1.0_16.1_07317.t1 | 1 | 1 | Reprolysin_2 | 238 | 442 | 4.9e-23 | 82.0 | 3.4e-26 | 8.4e-23 | 81.2 |
| pfu_aug1.0_16.1_07317.t1 | 1 | 1 | Reprolysin_3 | 241 | 400 | 1.5e-06 | 28.7 | 1.1e-09 | 2.8e-06 | 27.8 |
| pfu_aug1.0_16.1_07317.t1 | 3 | 2 | Reprolysin | 378 | 451 | 2.0e-09 | 37.3 | 3.0e-07 | 0.00075 | 19.1 |
| pfu_aug1.0_16.1_07317.t1 | 3 | 3 | Reprolysin | 621 | 664 | 2.0e-09 | 37.3 | 0.57 | 1400.0 | -1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16.1_07317.t1 | gi|157103466|ref|XP_001647994.1| | AAEL003910-PA [Aedes aegypti] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 2 |
| 8-16cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07317.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07317.t1 atgctgaaagtcgtcttgttttggatagaattactagtgttgattagagcctcatcagctgatctgtcaaagagacttca ttactacgagacaattcatcatacccatgtaaaatcccgtgtccgcagaagtgccgaccaaaatcctgcatctcaccttc atcaaatatggttcaatgcatacagtaggtcatttcatttcatgctacatcaatcttccatcttacccagggactttcat gccaaatatctacgcaaaaataaagtagaattattccacgtaccgcagagtgactttttagttggaagattagtagatga tgactcctcacatgttgaggcacattgggagggtcagtatctcacagcaagtgttactacagcaaaagatgtgttcattg tagagccgtcctggcgtcacttaggtcattcgtccaatcatagcatgatcatttacagacagagggatcttatacaatca tctccacacagcatggctggtatcaatttaccagcaagtttttgtggtgtaaacaactcacagcattataaaaataatac tcaaagatacacaactttatttacagatcataaacatgtgagattaaagcggcagacaaccccaacaatttcatccaaca tggtgtgcgagttagtggtcgtagccgattataaattccataagtacgttggaggagagagcaaacattttacagcaaat tatattattggtattttaaacagagtgaattccatttatatgcagaccagatggccagatgataattctgacattactgg cctggggtttcaaattacagagatgaaaatccatgaagattacacgacaggtgctgaacattacaacatgcagaaagaca cgtggaacaccacacatctattacaggtatttagccgtggcactgacttcaaagatttctgcctagcacatttatttaca tatcataagtttaccagaggggtgctggggctggcatatattgcagggcgtggttccaaacagcctgggggcatatgctc tacaggaccaacggcagggaaagtgtttactctaaacggctatgcctcaacattcaatacgggatggagctcagctcaga acagcgagggtaacagagttctctctcttgaggcatcactagttaccgctcatggtcataattggggaagtgagcatgat aatgctggatgtataccgacaaatggaggaaattatctcatgtatcaatactcagtgactggatatgatcctaataactt gattttttcatcttgtagcaagaggtatatttataatgtgattaaaaccaagagctcctcctgcttcaaagacaggaaaa gttccgcagtctgcggtaacggcagaatagagggtacggaggaatgcgacgccggctggaacggtgacgcatgctgtacg gcggactgccatttacgtgccggtacgggtgccatttgtagtcccatgaattacgaatgctgcagcgaagactgccgtgt ggccgaccaaggaaccatttgtcattcattggttgatgatagggcaacgtgtaaaaatatgtcattatgcaacggtgtag ataaagattgtccaccagcctcgaacaagaaagataactcttcctgtatcgatggtggtaaatgtagaaatggtgtgtgc cttaatttctgtgaaatccgaggaaaagtcccctgtatctgtccacagaagagtgggtttgcatgttataggtgttgtaa attatttcccaatgataccgaatgcattcccgagtccccgtacgaacaattaccaaatggtcggccatgcttccagggaa cgtgtagtaacggtaaatgtgagaaacagatcagtgacgtagtacagagacttttctccattatagaatcaatcactgct gatgaatttgtggattttatgaagagtaacatcgtggctaccatagttatattctctctgctgatatggattccagccag ctgtacattcagtcattttgacaaaaaacgagaacgtaaaatcagaggagaacacaacagatggaaaagtagatcgacct acacactattattggaagaggacaaacgcaaatttccacacgtccgattaaaaaatgttggaggtagtgtcatccgtcac catggaaaccccattcacctcactcagagtcttctgaactcttctcacaaccatgatatgataaaagaatccaaagtcta a |
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Protein
| Protein ID | pfu_aug1.0_16.1_07317.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07317.t1 MLKVVLFWIELLVLIRASSADLSKRLHYYETIHHTHVKSRVRRSADQNPASHLHQIWFNAYSRSFHFMLHQSSILPRDFH AKYLRKNKVELFHVPQSDFLVGRLVDDDSSHVEAHWEGQYLTASVTTAKDVFIVEPSWRHLGHSSNHSMIIYRQRDLIQS SPHSMAGINLPASFCGVNNSQHYKNNTQRYTTLFTDHKHVRLKRQTTPTISSNMVCELVVVADYKFHKYVGGESKHFTAN YIIGILNRVNSIYMQTRWPDDNSDITGLGFQITEMKIHEDYTTGAEHYNMQKDTWNTTHLLQVFSRGTDFKDFCLAHLFT YHKFTRGVLGLAYIAGRGSKQPGGICSTGPTAGKVFTLNGYASTFNTGWSSAQNSEGNRVLSLEASLVTAHGHNWGSEHD NAGCIPTNGGNYLMYQYSVTGYDPNNLIFSSCSKRYIYNVIKTKSSSCFKDRKSSAVCGNGRIEGTEECDAGWNGDACCT ADCHLRAGTGAICSPMNYECCSEDCRVADQGTICHSLVDDRATCKNMSLCNGVDKDCPPASNKKDNSSCIDGGKCRNGVC LNFCEIRGKVPCICPQKSGFACYRCCKLFPNDTECIPESPYEQLPNGRPCFQGTCSNGKCEKQISDVVQRLFSIIESITA DEFVDFMKSNIVATIVIFSLLIWIPASCTFSHFDKKRERKIRGEHNRWKSRSTYTLLLEEDKRKFPHVRLKNVGGSVIRH HGNPIHLTQSLLNSSHNHDMIKESKV |
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