Gene
| Gene Model ID | pfu_aug1.0_16.1_07318 |
|---|---|
| Locus | scaffold16.1 : 692129 ... 697144 : - |
| To GenomeBrowser | scaffold16.1:692129..697144 |
| Genes list of scaffold | scaffold16.1 |
| Synonym | pfu_aug2.0_1509.1_31724 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16.1_07318.t1 | 2 | 1 | SLX9 | 10 | 25 | 1.0e-20 | 74.3 | 0.45 | 2200.0 | -1.0 |
| pfu_aug1.0_16.1_07318.t1 | 2 | 2 | SLX9 | 88 | 206 | 1.0e-20 | 74.3 | 2.1e-24 | 1.0e-20 | 74.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16.1_07318.t1 | gi|291228689|ref|XP_002734316.1| | PREDICTED: protein FAM207A-like [Saccoglossus kowalevskii] | 1.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_16.1_07318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07318.t1 atgggaaagcagaagaggtccagatctaaagcacacatttctgcagtaaaaccaaatggaaagaaaaatgatgcaaatgt tgacaacaacaaagttgacgtagttgattcaatggatacggatgttaaggttcaaaccatggcagattttatcaatagat ctgataacatttttagtgatgtgaagattgatccacaagctctcgccaagaaactaccagattttgatgctagaagcgct attacgagcaagtctctaaaagagctgaaattaaagaaaaaagacaaaaagaagttacgacatgacctttggatcaagaa gttaagtgccatagatgcagccaagaaagaggctaaggaaaagaagaggagacagcagacccctgtggtgggggatatag gggcaatgggcgacgccctacctacattagatctactgatgatgggagacaaaaagaaaaaagagagacctgaggaaaaa ccaagaagtgttcctaaagaaaagaagcggaagaaacaaatgttagacgatatagcactctttcatcaagtcacggcaca tcccgcattcaaagaaaatccaacgtcaacaataaaagaacatttagaaaataaactcaaacaagatgactcgatggaaa cgtaa |
|
Protein
| Protein ID | pfu_aug1.0_16.1_07318.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16.1_07318.t1 MGKQKRSRSKAHISAVKPNGKKNDANVDNNKVDVVDSMDTDVKVQTMADFINRSDNIFSDVKIDPQALAKKLPDFDARSA ITSKSLKELKLKKKDKKKLRHDLWIKKLSAIDAAKKEAKEKKRRQQTPVVGDIGAMGDALPTLDLLMMGDKKKKERPEEK PRSVPKEKKRKKQMLDDIALFHQVTAHPAFKENPTSTIKEHLENKLKQDDSMET |
|