Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_16015.1_54261
Locus scaffold16015.1 : 1 ... 9752 : +
To GenomeBrowser scaffold16015.1:1..9752
Genes list of scaffold scaffold16015.1
Synonym pfu_aug2.0_561.1_04343

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_16015.1_54261.t1 1 1 Peptidase_A17 1367 1530 5.20022e-42 143.3 2.8026e-45 1.29998e-41 142.1
pfu_aug1.0_16015.1_54261.t1 1 1 rve 1802 1932 1.4e-08 34.8 2.1e-11 7.8e-08 32.4

Transcript
Transcript IDpfu_aug1.0_16015.1_54261.t1
Definition-
>pfu_aug1.0_16015.1_54261.t1
ttttcaccctctccggaggtctatacaagtttcaacagaataaagagagcttcctgaagtcttgtcacattctgtatagt
gaaaatccttgtacctggtttggattggtgccttcttgcagaaacagaatggcaacagcatcactacctgatgtagacat
caacatggaggtcaggccagaccgtgacctgagacgtgtacgcagcctaacgtcagtggctatcacacagtatgaagaaa
gagttcaacgatatgtagtgaaacttgcctcgatgcgtcgaaatttagactgcattctcatggttgtcagtgagaagcga
tacatagatctcagcactgctagtgcgatttgtaccgacattaaacatttcatgacaagatatgacaagctttcagctga
ctttgtggatttcttgaggagacagaaatctcgtgaagcgaataatgaacttaccatgcatatgttaactgccgacaacc
tacgcactaaggttagcactgcactgtcaaaattaggcccttcagatttaggagaccgcttggatccctttcagaaaata
agtggttcgttgaggaatagctcgggattgtctacagttgtagtacagcacagtgctaaactaaaagaagctaaaataaa
ccttcagtatgcgaaacgtgaagctgcaccaatgcgtagggaagtagatattaaagcagaactaagtctacttaagataa
aacaggaactcgatgttgcggagtcaaatttgctgactgtaaaaaaagccatgaatttttcgtcaactagcgcatgttat
gactccactacttgtgaccattttgatcgtgcaccgccgtcagttgtcgacagtgacattcgcagtgatcattcttcgaa
ggcaactcagaggaccgtcgagtttattaacgatcagattcagcgtgtaaatggtcaatcacctgttatgaacaatcctg
catcgcatacgcttgaaccacacgtgtcttactgttcgtcatctggcacatatgaaccacccgtgattaacgttttgaca
tctgacccgtatgatccacataggtcagaccgcgcatcatccgggacgtacagaccacctgtgataaacaattcttcatt
gcctacgattgaaccatgcgtgtctaaccgtttgtcgtttagtacatataaaccacccttggttgacgcattgacatctg
actcatatgatccgcttaggtcagactgcccgtcgtcccatatgtacggactgcctgtggtaaacgattcgataacttct
gtaaaacatatttcaccagttcagaactctactttgctctgtggatatgatccttctattacgaaccatactgcacccgc
gacgcacactttccctaatccatgtgcaaaagaatttacacccgcatctcgaaatataaatgtggagtgtcaggaacttg
caaaatttatggttaaaaaggatcttttaacctcaaggttgaccgtattcgatgaccaacctgcacattatgcgtactgg
aaagctagtttccaaaacattatgactgaattagatgcaactcctctggaacacttggatttgttggtcaagagcttagg
accgaactcaaaacaacaagctatgaacattcgttctgcgaatccgtctgatttaccgaaagctgtgaagctcatatggg
aacgcttagaggaccggtttggttgtccagagatgatcgaagctgcgttgcgacaacggatcaaagtattcccgaaactt
aatgattcgcaccgtgccgaactatatgaactttcagatctagtagcggaagtagaatcagttaaggcgaatccctgctt
ccagagtttattcgcatatttcgactcatctgctggggttaacctcatagtgaacaagttaccaggtcggatacaggaga
aatggacgaatgaggctaacaaatataaacaaaatcattcagttgcatacccgccgtttagctttttcagcacattcatg
cgaaacgttgctaagatgaaaaatgatccaggttttatctacgatcaacaaccatttcagggagcaggaaaaggcccctc
tcgtcaacttaagtccgataaagggaaccaacaggggttagtagtcagtcgtaaaactgaggttgaggcaaaggaaggtc
gtaaggaagaacattcatgtcctattcataacacaggacatacactcaacaaatgtcgtgcgtttcttttaaagcctctt
gctgaacgaaaggatttcgttaaaaaacagggctactgctttaagtgttgtggacccataaagcacctcagtaaaaagtg
caaagaggttgttaaatgtgacgtatgcaactcatccgaccacccctcagcccttcatcctgatcgttctccaggagccg
cagaacagcatgagggggagaaggagaaaactcaggttaagaccacgtgtaccgatatatgcgatacctcgtacagcact
aacaggtcatgcgcaaaggtcatactcgtaaacgtttatccagcggataaaaaatggctgtcgagacgtgtttactgctt
actagatgatcaaagcaaccgatcattagctacttctaatctttttgacacctttggtaacgatacccaggatatcgtgt
acactcttgattcatgcgcgggacaagttttgactgctggtcggagagcagctggctatgtcgttgaatcattggacagt
tcattttgcctgaacttacctgaacttgtggaatgtaacaatattccgaataaccgtgacgaaataccgttacctgcgat
cgccgaaaagtactcacacttacaagatattgcgctacacatacctcctctcgacgaacaggctaatatcgagctgttga
ttggtcttgatctcattgaggccttttatgttctggaggaccgtgttggaaaaccgtatgctcagcgccttccgctaggt
tgggtgatattcggtaatgtttgtctaggaaaagtccatggttctgaagttgtgagcgtaaataaaataaacgtacttag
agatggacgcccaaccttacttgatccctgtgacaagagcattactgtggaagaagatccgatttttggaagggttcacg
gtgacgagaggccagggttatcaatcgaggaccgtgttttcatggacatagtcgagtcaaaaattattaaaggaagtgat
ggtcaatggacagcgcctttgcccttcaatcctaatagaccgttgttgccgaacaacagatctttagccgtacgtcgtgc
gaaatctctggacatgagcattgaacgcaatccagtgaagcgtaagcacgtgattgactttatacagaaacttctcgaaa
atcagcatgcagaacctgctccggaaataccagcgtccaaggaacgatggtaccttccgcttttcggagtctatcatcca
atgaagcccgacaagataaggatggtattcgatagctccgcccgctttcaagatgtttctctaaacgatgtactgctgaa
agggccagatctctgtaacagcttactggggattctcctgaggtttcggcgtgaggctgttgcagtaactatggacatcg
aacagatgttttacaactttaaggtgacaacagaccatagagatttcctgaggtttctatggcatgcggataacgatcct
gaaaaacctctcgttgactaccgtatgactgtgcaagtattcgggaacagcccaagccctgctatcgcaacgtatggtct
gcgaaaatccattgagggctgcgatgaggacgtcaaggaacttgtaactcagaacttttacgtcgatgatggccttttct
cttgtcatgatgaggacgaggctattggattggtacacaggaccaaagatgctttgtatgaaggaggcggcttaagactt
cacaagtttgcatcaaataaccgtcaagttctggattcgttcaaatccgatgatcttgcaaatgactttaaagaccttga
ccttgggagtgatgcactgccaatgcagcgtagcttaggtctcctctggaatacagaacacgacgtattcacatttcgcg
tctccaaagacataaagccatacacaaagcgtggtgttctctcgactataaacagcgtctatgacccacttgggtttgcc
tcaccagtcgtaatccgaggaaaactcctactcagggacggaatgacttcttccgagaagctagagtgggacgatccctt
accgaattctcttcgaaacgaatggcaggcttgggtcgagtctcttaaacatcttgaggctctgcgcatccaaagaaaat
acagccacatctctttctcaaacgcaactactcgtgaagttcacatattttgcgatgcctctaaagaggccattggagct
gtttcttacctgaagctgcgaacaaatgactcttctgatgtgagcttccttctagggaaagccaaggtgtcaccagcagg
tggacttaccattcctcgttctgagctttgcgccgcagtgcttgctgtggagcttgctgacatactaaaggatcagcttt
tgatagataccgattcattcttcttctacactgatagtcaagtggtactcgggtacattacaaatgagactagaagattc
tatgtctatgttggaaatcgggtcagtcgtatacgtctatcaagcaagccgacgcagtggaagtacgtaccgtcagatat
caatcctgctgatctcgctactaggtccgttgatgcaggagatcttcaaagcagcacatggttgaaaggacccgagtttc
ttagggaagactctgacgtatcacaaccgttaccttttcctatgatcgaaccggacagtgacaaggaggtccgacctgaa
gtgcgctgcttcaaaactgaggaggttgatacttacatcccaaagctcggatctcatcgcttcgagagcttctctagttg
gaagagcctcattcatgctatgtctttactgaaatatgttgctcggcttcatagtgaacatagagaatctgacttacctg
acaatccaaaggacccagattttattagagaaacccaacactttatcattcagactgttcaagaagaagtttacaagtct
gagattgatgctattaaaggggacagctctccgcctaagagcagtagtttgtcaactctatcaccagttttggacagaca
tggactcttgcgagttgggggaagactcggtaatggacgccatctaactgatggagccattcgagcagcgggattctgga
ttgttggcggtaaacagcttgtttactctgagatagcaaaatgtttgatctgtcgtaagttaaggggacagttaggatgg
cagtttatggcagatctaccggaagataggctgaaacctgctcctcccttttcgtatgttggagtggacacttttggtcc
ttggcctgtggtgcaccgtcgcactagaggaggcttagcccaccagaagcgctgggccctgctattcacatgtctcgtta
cccgcgctattcagattgaattgattgaggaactctcaagttcgtcctttattaacgcacttagacgacttgtcgcaatt
cgtggtccggtagttcagtttagatcagaccgtgggaccaacttcgttggtgctacagaggatctgtcaattgatgcaga
atttgtagagaaaggaccagtagggaaattcctttcgagctccggcacaacatggaaattcaacccgccccatgcgtcac
acatgggtggcgcatgggagaggctcattggtgtatcacgaaggatacttgattctatgcttttatgtgaccatactaaa
ggtacacatctcactcatgaagtacttgttaccttgatggcggaagtttccgcaattgtaaacaaccgaccgttgttacc
agtatcaagtgacccggattctccgtgtttattgacgccttctactttgctcaccatgaaaaccgataaggatgtgagcc
cgtttcctctctttggaccgaaggatatgctgaagtcacactggaaacacgtacaagtcctcgctgaagaattctggcgc
agatggaaggacgaatatttgcacacacttcagaaacgtgaaaaatggtttaaggagtgccgcaaccttaagcccggtga
tattgttttgatgagggacaaggacaatgtgcgtaatgattggccaatggggatcattgaaaggaccttcccaagtcaag
acggcagaatccgcaaagtcgaactcactgttgttaaggacgataagcgttccaccttcatcagacccgtgtctgagcta
gtgctcctcttagaagtgtgttaa

Protein
Protein IDpfu_aug1.0_16015.1_54261.t1
Definition-
>pfu_aug1.0_16015.1_54261.t1
FTLSGGLYKFQQNKESFLKSCHILYSENPCTWFGLVPSCRNRMATASLPDVDINMEVRPDRDLRRVRSLTSVAITQYEER
VQRYVVKLASMRRNLDCILMVVSEKRYIDLSTASAICTDIKHFMTRYDKLSADFVDFLRRQKSREANNELTMHMLTADNL
RTKVSTALSKLGPSDLGDRLDPFQKISGSLRNSSGLSTVVVQHSAKLKEAKINLQYAKREAAPMRREVDIKAELSLLKIK
QELDVAESNLLTVKKAMNFSSTSACYDSTTCDHFDRAPPSVVDSDIRSDHSSKATQRTVEFINDQIQRVNGQSPVMNNPA
SHTLEPHVSYCSSSGTYEPPVINVLTSDPYDPHRSDRASSGTYRPPVINNSSLPTIEPCVSNRLSFSTYKPPLVDALTSD
SYDPLRSDCPSSHMYGLPVVNDSITSVKHISPVQNSTLLCGYDPSITNHTAPATHTFPNPCAKEFTPASRNINVECQELA
KFMVKKDLLTSRLTVFDDQPAHYAYWKASFQNIMTELDATPLEHLDLLVKSLGPNSKQQAMNIRSANPSDLPKAVKLIWE
RLEDRFGCPEMIEAALRQRIKVFPKLNDSHRAELYELSDLVAEVESVKANPCFQSLFAYFDSSAGVNLIVNKLPGRIQEK
WTNEANKYKQNHSVAYPPFSFFSTFMRNVAKMKNDPGFIYDQQPFQGAGKGPSRQLKSDKGNQQGLVVSRKTEVEAKEGR
KEEHSCPIHNTGHTLNKCRAFLLKPLAERKDFVKKQGYCFKCCGPIKHLSKKCKEVVKCDVCNSSDHPSALHPDRSPGAA
EQHEGEKEKTQVKTTCTDICDTSYSTNRSCAKVILVNVYPADKKWLSRRVYCLLDDQSNRSLATSNLFDTFGNDTQDIVY
TLDSCAGQVLTAGRRAAGYVVESLDSSFCLNLPELVECNNIPNNRDEIPLPAIAEKYSHLQDIALHIPPLDEQANIELLI
GLDLIEAFYVLEDRVGKPYAQRLPLGWVIFGNVCLGKVHGSEVVSVNKINVLRDGRPTLLDPCDKSITVEEDPIFGRVHG
DERPGLSIEDRVFMDIVESKIIKGSDGQWTAPLPFNPNRPLLPNNRSLAVRRAKSLDMSIERNPVKRKHVIDFIQKLLEN
QHAEPAPEIPASKERWYLPLFGVYHPMKPDKIRMVFDSSARFQDVSLNDVLLKGPDLCNSLLGILLRFRREAVAVTMDIE
QMFYNFKVTTDHRDFLRFLWHADNDPEKPLVDYRMTVQVFGNSPSPAIATYGLRKSIEGCDEDVKELVTQNFYVDDGLFS
CHDEDEAIGLVHRTKDALYEGGGLRLHKFASNNRQVLDSFKSDDLANDFKDLDLGSDALPMQRSLGLLWNTEHDVFTFRV
SKDIKPYTKRGVLSTINSVYDPLGFASPVVIRGKLLLRDGMTSSEKLEWDDPLPNSLRNEWQAWVESLKHLEALRIQRKY
SHISFSNATTREVHIFCDASKEAIGAVSYLKLRTNDSSDVSFLLGKAKVSPAGGLTIPRSELCAAVLAVELADILKDQLL
IDTDSFFFYTDSQVVLGYITNETRRFYVYVGNRVSRIRLSSKPTQWKYVPSDINPADLATRSVDAGDLQSSTWLKGPEFL
REDSDVSQPLPFPMIEPDSDKEVRPEVRCFKTEEVDTYIPKLGSHRFESFSSWKSLIHAMSLLKYVARLHSEHRESDLPD
NPKDPDFIRETQHFIIQTVQEEVYKSEIDAIKGDSSPPKSSSLSTLSPVLDRHGLLRVGGRLGNGRHLTDGAIRAAGFWI
VGGKQLVYSEIAKCLICRKLRGQLGWQFMADLPEDRLKPAPPFSYVGVDTFGPWPVVHRRTRGGLAHQKRWALLFTCLVT
RAIQIELIEELSSSSFINALRRLVAIRGPVVQFRSDRGTNFVGATEDLSIDAEFVEKGPVGKFLSSSGTTWKFNPPHASH
MGGAWERLIGVSRRILDSMLLCDHTKGTHLTHEVLVTLMAEVSAIVNNRPLLPVSSDPDSPCLLTPSTLLTMKTDKDVSP
FPLFGPKDMLKSHWKHVQVLAEEFWRRWKDEYLHTLQKREKWFKECRNLKPGDIVLMRDKDNVRNDWPMGIIERTFPSQD
GRIRKVELTVVKDDKRSTFIRPVSELVLLLEVC

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495