Gene
| Gene Model ID | pfu_aug1.0_16043.1_61570 |
|---|---|
| Locus | scaffold16043.1 : 516 ... 41816 : + |
| To GenomeBrowser | scaffold16043.1:516..41816 |
| Genes list of scaffold | scaffold16043.1 |
| Synonym | pfu_aug2.0_101.1_03623 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16043.1_61570.t1 | 1 | 1 | UCH | 2 | 110 | 4.5e-15 | 55.4 | 8.9e-19 | 1.3e-14 | 53.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16043.1_61570.t1 | gi|291234105|ref|XP_002736998.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Saccoglossus kowalevskii] | 3.0e-31 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_16043.1_61570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16043.1_61570.t1 atggctcctaagaagttcatcacacgattaaggaaagaatatgagttgtttgacaactttatgcagcaggatgctcacga gttccttaattatctcctcaacagagtctcagaactactacaagctgacaagcaaggtaacaaaccaaagaatgggtcca atgaaggtcagagtaaatctgagccaacctgggtagaagatttattccagggaacgtttaccaatgaaacccgttgcctt aactgtgaaacattgatgaggatagaggaatttcgtgatatgtatcatgctatagaaaaacatcacaggaatatgagatt ggcacatctcacaggacaggctcctgacctcaagttgcgtacaaaggagcaaagagagtcactgctgaaagtccacactt ggttccagtctaacaagcatattctacacagtgggcctaaatttggcaaagaacagatcaagaaagaagttgatgaaaaa tatgggaaaaccacacctcgaactccaaaaagtgctggaacagcacggaaaagtaaaactcccagaacacctaaaccagt ggaggagaaaaaagaggtaccagaggaaaagcctgtagtaactagacttacgtcagccgagggcatgagaaacttcttca agagtgtaacgccatccactcagttaaacggagcagaaactccacagggattccttcatctagatctacctactcacagt gataaagtaaacgagttcctcactagtcgattctttatggcgggagaattgacaggatttggtagacctcctaccacaga aaccccaaccaatcgtgtttactttggtgaccaagagccaacagagagaaacccggccatagaaagatttataactagtc ctaatttcttagatggaccagatctggagttacacggcttggacagtccccttggtgatttaggagaggtagaggaggga agtggccacacccctgctcctcgttcttccccacgcgagggacccgcctctgtagctagtcaacgttatgtagaaagcat aactcctcgtagtaaccttgacattgaccctgatgaagacgaccttggcacgccccactcaggtcacccagaagacgatt taagcatgccagaattaaggaggaagctgtcacgaggtaacctgaactttgttggtcggagcggcacggcgatggacgtg cgttactcagcacacgactatggtcacatgccagaagaagaaacgccttttttactgactttgtttagcgatagtgaaaa ttctcctcctactgcaaaggttgtacccctgactccacgaccaacggaagtacaggaaatttatacccagaattccttgg aggaattttaccagctgacagacggttattatcctcccaagttacctaagtaccatcatcctgtggtcagtaagcctaaa acccctggatccaccaagtcagaccacctggatccctcttctagggccacgtcagctaagacagctccactgggcaggga tttattgggcaaaggagagagtgagaagaaagaagagactccaaggagaagtcagtcagaaatgaagttaaccaccgttg tcaacatgatcgataccgtgtcaggggaaatgaactatttcaaagaaaagaatttcctgcgtagttttagcagtggacgt tacacacctggtactacagtgactgccacgcctattcccatggagtatgttcctatagtggccactgcacctaaaagttt aatggagagtcgcactcaaagtcggcaaacacgtaaatctgatagggcggacagcagatttgagggaccttctctagaac tagaagatgaaggacagattggggacaatttcaaaataacagctgcagatagtcacgaagatcctaatacctttgagacc ttccctcaagaaacagaatacatacagactgaagacaccacagacagacaagaggacaactttgttgctagagaaatagc agtacagactgacatatcaaggattaatgagagggaagacagtgagacagcgcggagtgtatacaatgaggatagttcta ggaatatagaagctgtacaagaggagcagagtgatgcgtgctcagtagatgctaacgtaacaaacccaaatcaacaagtt cagttttatacggaagatttacacaatggcaaggttcatatagaggtgttagcagtgccatctggtggtagaccaccaac tccgcctaatgaacgtgatggtacatcaccacagcaactaacaaagtctgatacatggcaatttactccattggatgaaa atcaacgaccatatttggatttgaggaagaaaactttaaaccctgatctgtatcataagggtgaacattggacgaaagct atcgttaaacctgagaattattgttttcattgcttacctgacagtatgtcaacaaaagtaggtcgttcagcgggccgtat gcctgggcgtacccagagtgcgtcatcacaggtgttacgcatggcgaggaagcagaatgagtactttaagaaggcaccac ctgttaggactcccccgtcaattcctcgcccctatcatcagaccatagggcaggacaccacaccaagacaaggagagacg tataaagcagaattggagcatcacgcacgtaaagtgaaaagtcctcgacactttatggaacaaggtacataa |
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Protein
| Protein ID | pfu_aug1.0_16043.1_61570.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16043.1_61570.t1 MAPKKFITRLRKEYELFDNFMQQDAHEFLNYLLNRVSELLQADKQGNKPKNGSNEGQSKSEPTWVEDLFQGTFTNETRCL NCETLMRIEEFRDMYHAIEKHHRNMRLAHLTGQAPDLKLRTKEQRESLLKVHTWFQSNKHILHSGPKFGKEQIKKEVDEK YGKTTPRTPKSAGTARKSKTPRTPKPVEEKKEVPEEKPVVTRLTSAEGMRNFFKSVTPSTQLNGAETPQGFLHLDLPTHS DKVNEFLTSRFFMAGELTGFGRPPTTETPTNRVYFGDQEPTERNPAIERFITSPNFLDGPDLELHGLDSPLGDLGEVEEG SGHTPAPRSSPREGPASVASQRYVESITPRSNLDIDPDEDDLGTPHSGHPEDDLSMPELRRKLSRGNLNFVGRSGTAMDV RYSAHDYGHMPEEETPFLLTLFSDSENSPPTAKVVPLTPRPTEVQEIYTQNSLEEFYQLTDGYYPPKLPKYHHPVVSKPK TPGSTKSDHLDPSSRATSAKTAPLGRDLLGKGESEKKEETPRRSQSEMKLTTVVNMIDTVSGEMNYFKEKNFLRSFSSGR YTPGTTVTATPIPMEYVPIVATAPKSLMESRTQSRQTRKSDRADSRFEGPSLELEDEGQIGDNFKITAADSHEDPNTFET FPQETEYIQTEDTTDRQEDNFVAREIAVQTDISRINEREDSETARSVYNEDSSRNIEAVQEEQSDACSVDANVTNPNQQV QFYTEDLHNGKVHIEVLAVPSGGRPPTPPNERDGTSPQQLTKSDTWQFTPLDENQRPYLDLRKKTLNPDLYHKGEHWTKA IVKPENYCFHCLPDSMSTKVGRSAGRMPGRTQSASSQVLRMARKQNEYFKKAPPVRTPPSIPRPYHQTIGQDTTPRQGET YKAELEHHARKVKSPRHFMEQGT |
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