Gene
| Gene Model ID | pfu_aug1.0_16071.1_10884 |
|---|---|
| Locus | scaffold16071.1 : 1 ... 7955 : - |
| To GenomeBrowser | scaffold16071.1:1..7955 |
| Genes list of scaffold | scaffold16071.1 |
| Synonym | pfu_aug2.0_1018.1_27985 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16071.1_10884.t1 | 1 | 1 | SH2 | 369 | 426 | 9.6e-11 | 41.3 | 3.9e-14 | 2.0e-10 | 40.3 |
| pfu_aug1.0_16071.1_10884.t1 | 1 | 1 | SOCS_box | 469 | 503 | 1.7e-10 | 40.5 | 7.8e-14 | 3.9e-10 | 39.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16071.1_10884.t1 | gi|307169858|gb|EFN62367.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_16071.1_10884.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16071.1_10884.t1 atgaaaaatggagatgaggagattgtccacctcgcatcaaacgaggaaggagatccaggggaagtagacgacacacctaa caaccaacgtattagtagtactagcttagaactgccaaccagacccaaaacaacaccgacaaaacccataaacaacctaa caaagaaaaacaacgaaatagacagggaggagggtggtgcaaatatggccgctcagaaactgacccccatacagaactta cccagaaacaacaacagagtgttcaaatctcctgtacggccattcttctgttgtggtagccagttatcactgaacagtgt gtcagagttcatagaattagaacagagtacatcagacaaggaggagacggagtttacagacctatcagactgtgatgaag tgacagacttaatggcaaatttagccatgcnaatccttctttccatggataccggaagttttgaccatgtgaccttgacc ttggagtttgtcatacttcagaaaaaaatctttaactgttgttgtgaggatgaggcagctctgcaagagccttgtgtgtg tacaacagcaggtgatggtgctaacgcaagccaggattacacaagtgcaatagggatcggtgccaatcgagaccagcaac acggtgcccatgcttcacaaaatattggtgctcggtcacttgcagctgaccatggtcagaggctacaggaattctttctg ctggcccctgttaactttgatgaactttatccgacagaggacattgatgagcggaggattgcccaaaggaggcgagaaat ggaggaaggtattgagatgtccgacatatgggtgccacaaagtgtccagatagggggagccactggtccacatgacctgt cattagaggatgaagattacgatgacacgtttctttcatttcaaactcaaaatcaccgagacagcagtgctactgattac gaggaatctctgtacggagagtgctcctttcccataccttgtaacgttttctccagaaactcttacgtaccccaaagagc gcattccactgtagactatattcattgtcttttgccagacattcttcagataaccaaatgtagttactattggggtgtta tggataggtaccaagcagagaagttgctggacaaaaaaccagagggtactttcctgttacgtgacagtgcccaggacgac tacctcttttctgtaagctttcggaggtatggtcgatcacttcatgctcgcatagagcagtggaaccacaagttcagttt tgactcccatgaccctggtgtgtttgcctcagacacagtgtgtggacttatagagcattacaaagacccgtcctgttgta tgttctttgagcccatgctgactcttcctctacacagaaatatgccattcagtctacagcatctgtgccgtgctacaatt agtaactatgttaattatgacagcattaatcagttacctctgccaaaaacgctgagagaatttatgagatattatcacta caaacagaaaatcagggtgcggagacatgatggaaatttggtttaa |
|
Protein
| Protein ID | pfu_aug1.0_16071.1_10884.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16071.1_10884.t1 MKNGDEEIVHLASNEEGDPGEVDDTPNNQRISSTSLELPTRPKTTPTKPINNLTKKNNEIDREEGGANMAAQKLTPIQNL PRNNNRVFKSPVRPFFCCGSQLSLNSVSEFIELEQSTSDKEETEFTDLSDCDEVTDLMANLAMXILLSMDTGSFDHVTLT LEFVILQKKIFNCCCEDEAALQEPCVCTTAGDGANASQDYTSAIGIGANRDQQHGAHASQNIGARSLAADHGQRLQEFFL LAPVNFDELYPTEDIDERRIAQRRREMEEGIEMSDIWVPQSVQIGGATGPHDLSLEDEDYDDTFLSFQTQNHRDSSATDY EESLYGECSFPIPCNVFSRNSYVPQRAHSTVDYIHCLLPDILQITKCSYYWGVMDRYQAEKLLDKKPEGTFLLRDSAQDD YLFSVSFRRYGRSLHARIEQWNHKFSFDSHDPGVFASDTVCGLIEHYKDPSCCMFFEPMLTLPLHRNMPFSLQHLCRATI SNYVNYDSINQLPLPKTLREFMRYYHYKQKIRVRRHDGNLV |
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