Gene
| Gene Model ID | pfu_aug1.0_16083.1_18305 |
|---|---|
| Locus | scaffold16083.1 : 1 ... 9708 : + |
| To GenomeBrowser | scaffold16083.1:1..9708 |
| Genes list of scaffold | scaffold16083.1 |
| Synonym | pfu_aug2.0_86.1_20185 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_16083.1_18305.t1 | 1 | 1 | A2M | 70 | 119 | 5.4e-15 | 54.7 | 9.8e-18 | 2.1e-14 | 52.8 |
| pfu_aug1.0_16083.1_18305.t1 | 1 | 1 | Thiol-ester_cl | 246 | 276 | 2.2e-16 | 58.7 | 2.0e-19 | 4.2e-16 | 57.8 |
| pfu_aug1.0_16083.1_18305.t1 | 1 | 1 | A2M_comp | 295 | 398 | 5.7e-36 | 123.9 | 3.9e-39 | 8.3e-36 | 123.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_16083.1_18305.t1 | gi|144952812|gb|ABP04060.1| | thioester-containing protein [Azumapecten farreri] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_16083.1_18305.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16083.1_18305.t1 atccatttgctgccgccggaggaggttttggaggaggaggcggaggagaaatattcccggcgatggcaggaggtgctgtg ccaaacagtgcttttggtggcggagcgggtggaccagcaccacttcagacagttcaaagggtcaggaatgtctttcctga gacatggctttggactaattcaacaacgggattacgaacacctggcttttggggcgggagtggaaaagatagaagctttc cgaccattctttgtcagtctgaatctcccgtactctgtggtaagaggggagcaggtagctcttcaagccaacgtcttcaa ctacatgagccaggacatggatgtattggtgacacttgagaagaacgatgacttcagaagcattgtaatgcagggtggtc aagaaaccttcgtgtccagtgtgcagactaaaactgtcaaggtagctgctggcaaagccaagtctgtattcttccccatt gtaccagcagctctaggtaacattgacattaccgtgaaggctcaatcaaccatggctgctgatggcgtcagaagacaact tcttgttgagccagagggtgtgccaaaggagtacaatcttccaatactgatagatctgaaacagacctccaccttcacta ccacagtaccactaacgttaccgcctggagtagtggcgggatctgagacggtcaggattaccgccataggtgacttaatg ggaccaacagtgaatggactggataaactccttaaaatgccttatggatgtggagagcagacgatgttaggctttgcccc tgatgtcttcgtcaccaactatctgacagctactcaccaactctcacctgatattgaggataaagctgtaggattcatgg aaaagggataccagagggagttgacattccagcacaaagatggatctttcagtgcgtttggggataatgacaaatcagga agcatgtggttgactgctttcgttgcaaaatcattccatcaagccaaacagcatatattcattgatgatgagacactaac acgagccattgactggatgattgctagacagagcaaagatggttccttccccgagcctggccgtgttatccacaaagaca tgcagggtggttcagcatcaggaccaggtcttacagcgtttgtattgatctctctgctagaaaacaatgatctacaagga gtgagtaacatttaa |
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Protein
| Protein ID | pfu_aug1.0_16083.1_18305.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_16083.1_18305.t1 IHLLPPEEVLEEEAEEKYSRRWQEVLCQTVLLVAERVDQHHFRQFKGSGMSFLRHGFGLIQQRDYEHLAFGAGVEKIEAF RPFFVSLNLPYSVVRGEQVALQANVFNYMSQDMDVLVTLEKNDDFRSIVMQGGQETFVSSVQTKTVKVAAGKAKSVFFPI VPAALGNIDITVKAQSTMAADGVRRQLLVEPEGVPKEYNLPILIDLKQTSTFTTTVPLTLPPGVVAGSETVRITAIGDLM GPTVNGLDKLLKMPYGCGEQTMLGFAPDVFVTNYLTATHQLSPDIEDKAVGFMEKGYQRELTFQHKDGSFSAFGDNDKSG SMWLTAFVAKSFHQAKQHIFIDDETLTRAIDWMIARQSKDGSFPEPGRVIHKDMQGGSASGPGLTAFVLISLLENNDLQG VSNI |
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